PDB entry 3rpi

View 3rpi on RCSB PDB site
Description: Crystal Structure of Fab from 3BNC60, Highly Potent anti-HIV Antibody
Class: immune system
Keywords: IgG, glycosylation, IMMUNE SYSTEM
Deposited on 2011-04-26, released 2011-07-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Heavy chain from highly potent anti-HIV neutralizing antibody
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3RPI
    Domains in SCOPe 2.08: d3rpia_
  • Chain 'B':
    Compound: Light chain from highly potent anti-HIV neutralizing antibody
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3RPI
    Domains in SCOPe 2.08: d3rpib1, d3rpib2
  • Chain 'H':
    Compound: Heavy chain from highly potent anti-HIV neutralizing antibody
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3RPI
    Domains in SCOPe 2.08: d3rpih_
  • Chain 'L':
    Compound: Light chain from highly potent anti-HIV neutralizing antibody
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3RPI
    Domains in SCOPe 2.08: d3rpil1, d3rpil2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rpiA (A:)
qvhlsqsgaavtkpgasvrvsceasgykisdhfihwwrqapgqglqwvgwinpktgqpnn
prqfqgrvsltrqaswdfdtysfymdlkavrsddtaiyfcarqrsdfwdfdvwgsgtqvt
vssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkt

    Sequence, based on observed residues (ATOM records): (download) 
    >3rpiA (A:)
vhlsqsgaavtkpgasvrvsceasgykisdhfihwwrqapgqglqwvgwinpktgqpnnp
rqfqgrvsltrqaswdfdtysfymdlkavrsddtaiyfcarqrsdfwdfdvwgsgtqvtv
ssastkgpsvfplaptaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
svvtvpssslgtqtyicnvnhkpsntkvdkrv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3rpiB (B:)
diqmtqspsslsarvgdtvtitcqangylnwyqqrrgkapklliydgsklergvparfsg
rrwgqeynltinnlqpedvatyfcqvyefivpgtrldlkrtvaapsvfifppsdeqlksg
tasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyek
hkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >3rpiB (B:)
qmtqspsslsarvgdtvtitcqangylnwyqqrrgkapklliydgsklergvparfsgrr
wgqeynltinnlqpedvatyfcqvyefivpgtrldlkrtvaapsvfifppsdeqlksgta
svvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyekhk
vyacevthqglsspvtksfnrge

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3rpiH (H:)
qvhlsqsgaavtkpgasvrvsceasgykisdhfihwwrqapgqglqwvgwinpktgqpnn
prqfqgrvsltrqaswdfdtysfymdlkavrsddtaiyfcarqrsdfwdfdvwgsgtqvt
vssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkt

    Sequence, based on observed residues (ATOM records): (download) 
    >3rpiH (H:)
vhlsqsgaavtkpgasvrvsceasgykisdhfihwwrqapgqglqwvgwinpktgqpnnp
rqfqgrvsltrqaswdfdtysfymdlkavrsddtaiyfcarqrsdfwdfdvwgsgtqvtv
ssastkgpsvfplaptaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
svvtvpssslgtqtyicnvnhkpsntkvdkrv

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3rpiL (L:)
diqmtqspsslsarvgdtvtitcqangylnwyqqrrgkapklliydgsklergvparfsg
rrwgqeynltinnlqpedvatyfcqvyefivpgtrldlkrtvaapsvfifppsdeqlksg
tasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyek
hkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >3rpiL (L:)
qmtqspsslsarvgdtvtitcqangylnwyqqrrgkapklliydgsklergvparfsgrr
wgqeynltinnlqpedvatyfcqvyefivpgtrldlkrtvaapsvfifppsdeqlksgta
svvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltlskadyekhk
vyacevthqglsspvtksfnrge