PDB entry 3rkj

View 3rkj on RCSB PDB site
Description: Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 from Klebsiella pnueumoniae
Class: hydrolase
Keywords: Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, alpha-beta structure, hydrolase, Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors, MTBI
Deposited on 2011-04-18, released 2011-05-18
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-03-28, with a file datestamp of 2012-03-23.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.195
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-lactamase NDM-1
    Species: Klebsiella pneumoniae [TaxId:573]
    Gene: blaNDM-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3rkja_
  • Chain 'B':
    Compound: Beta-lactamase NDM-1
    Species: Klebsiella pneumoniae [TaxId:573]
    Gene: blaNDM-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3rkjb_
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rkjA (A:)
snametgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtd
dqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmv
aaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdska
kslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rkjA (A:)
rfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtddqtaqilnw
ikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmvaaqhsltfa
angwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnlgda
dtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3rkjB (B:)
snametgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtd
dqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmv
aaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdska
kslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rkjB (B:)
rfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrvlvvdtawtddqtaqilnw
ikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmvaaqhsltfa
angwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnlgda
dtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr