PDB entry 3rh5
View 3rh5 on RCSB PDB site
Description: DNA Polymerase Beta Mutant (Y271) with a dideoxy-terminated primer with an incoming deoxynucleotide (dCTP)
Class: transferase/DNA
Keywords: DNA Polymerase Beta mutant, nucleotide transferase, ribonucleotide insertion, dCTP, TRANSFERASE-DNA complex
Deposited on
2011-04-11, released
2011-07-06
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-09-21, with a file datestamp of
2011-09-16.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.215
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase beta
Species: Homo sapiens [TaxId:9606]
Gene: POLB
Database cross-references and differences (RAF-indexed):
- Uniprot P06746 (Start-334)
- engineered mutation (270)
Domains in SCOPe 2.05: d3rh5a1, d3rh5a2, d3rh5a3 - Chain 'D':
Compound: 5'-d(p*gp*tp*cp*gp*g)-3'
- Chain 'P':
Compound: 5'-d(*gp*cp*tp*gp*ap*tp*gp*cp*gp*(ddg))-3'
- Chain 'T':
Compound: 5'-d(*cp*cp*gp*ap*cp*gp*cp*cp*gp*cp*ap*tp*cp*ap*gp*c)-3'
- Heterogens: DCP, MN, NA, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3rh5A (A:)
mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
lpskndekeyphrridirlipkdqyycgvlaftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdsekdifdyiqwkyrepkdrse
Sequence, based on observed residues (ATOM records): (download)
>3rh5A (A:)
tlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtki
aekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrkne
dklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessg
dmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndeke
yphrridirlipkdqyycgvlaftgsdifnknmrahalekgftineytirplgvtgvage
plpvdsekdifdyiqwkyrepkdrse
- Chain 'D':
No sequence available.
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.