PDB entry 3rg8

View 3rg8 on RCSB PDB site
Description: Crystal structure of Treponema denticola PurE
Class: lyase
Keywords: Purine biosynthesis, Carboxylase, Lyase
Deposited on 2011-04-07, released 2011-05-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-06-01, with a file datestamp of 2011-05-27.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: 0.167
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8a_
  • Chain 'B':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8b_
  • Chain 'C':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8c_
  • Chain 'D':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8d_
  • Chain 'E':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8e_
  • Chain 'F':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8f_
  • Chain 'G':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8g_
  • Chain 'H':
    Compound: Phosphoribosylaminoimidazole carboxylase, PurE protein
    Species: Treponema denticola [TaxId:158]
    Gene: PurE, TDE_0687
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rg8h_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rg8A (A:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8A (A:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddsk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3rg8B (B:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8B (B:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddskl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3rg8C (C:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8C (C:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddsklkr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3rg8D (D:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8D (D:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddskl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3rg8E (E:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8E (E:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddskl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3rg8F (F:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8F (F:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddskl

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3rg8G (G:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3rg8H (H:)
mrplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpk
lyitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepkna
allaarifslydkeiadsvksymesnaqkiieddsklkr

    Sequence, based on observed residues (ATOM records): (download) 
    >3rg8H (H:)
rplviilmgsssdmghaekiaselktfgieyairigsahktaehvvsmlkeyealdrpkl
yitiagrsnalsgfvdgfvkgatiacpppsdsfagadiysslrmpsgispalvlepknaa
llaarifslydkeiadsvksymesnaqkiieddskl