PDB entry 3rer
View 3rer on RCSB PDB site
Description: Crystal structure of E. coli Hfq in complex with AU6A RNA and ADP
Class: chaperone/RNA
Keywords: ADP, Hfq, DsrA, Sm fold, RNA chaperone, ATP and RNA binding, CHAPERONE-RNA complex
Deposited on
2011-04-05, released
2011-10-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-10-19, with a file datestamp of
2011-10-14.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.167
AEROSPACI score: 0.57
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Protein hfq
Species: ESCHERICHIA COLI [TaxId:511693]
Gene: B21_04001, hfq
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3rera_ - Chain 'B':
Compound: Protein hfq
Species: ESCHERICHIA COLI [TaxId:511693]
Gene: B21_04001, hfq
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3rerb_ - Chain 'C':
Compound: Protein hfq
Species: ESCHERICHIA COLI [TaxId:511693]
Gene: B21_04001, hfq
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3rerc_ - Chain 'D':
Compound: Protein hfq
Species: ESCHERICHIA COLI [TaxId:511693]
Gene: B21_04001, hfq
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3rerd_ - Chain 'E':
Compound: Protein hfq
Species: ESCHERICHIA COLI [TaxId:511693]
Gene: B21_04001, hfq
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3rere_ - Chain 'F':
Compound: Protein hfq
Species: ESCHERICHIA COLI [TaxId:511693]
Gene: B21_04001, hfq
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3rerf_ - Chain 'K':
Compound: 5'-r(*ap*up*up*up*up*up*up*a)-3'
Species: synthetic, synthetic
- Heterogens: ADP, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3rerA (A:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps
Sequence, based on observed residues (ATOM records): (download)
>3rerA (A:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3rerB (B:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps
Sequence, based on observed residues (ATOM records): (download)
>3rerB (B:)
gqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
ps
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3rerC (C:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps
Sequence, based on observed residues (ATOM records): (download)
>3rerC (C:)
akgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaist
vvps
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3rerD (D:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps
Sequence, based on observed residues (ATOM records): (download)
>3rerD (D:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3rerE (E:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps
Sequence, based on observed residues (ATOM records): (download)
>3rerE (E:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3rerF (F:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps
Sequence, based on observed residues (ATOM records): (download)
>3rerF (F:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s
- Chain 'K':
No sequence available.