PDB entry 3rer

View 3rer on RCSB PDB site
Description: Crystal structure of E. coli Hfq in complex with AU6A RNA and ADP
Class: chaperone/RNA
Keywords: ADP, Hfq, DsrA, Sm fold, RNA chaperone, ATP and RNA binding, CHAPERONE-RNA complex
Deposited on 2011-04-05, released 2011-10-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-10-19, with a file datestamp of 2011-10-14.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.167
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: ESCHERICHIA COLI [TaxId:511693]
    Gene: B21_04001, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rera_
  • Chain 'B':
    Compound: Protein hfq
    Species: ESCHERICHIA COLI [TaxId:511693]
    Gene: B21_04001, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rerb_
  • Chain 'C':
    Compound: Protein hfq
    Species: ESCHERICHIA COLI [TaxId:511693]
    Gene: B21_04001, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rerc_
  • Chain 'D':
    Compound: Protein hfq
    Species: ESCHERICHIA COLI [TaxId:511693]
    Gene: B21_04001, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rerd_
  • Chain 'E':
    Compound: Protein hfq
    Species: ESCHERICHIA COLI [TaxId:511693]
    Gene: B21_04001, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rere_
  • Chain 'F':
    Compound: Protein hfq
    Species: ESCHERICHIA COLI [TaxId:511693]
    Gene: B21_04001, hfq
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rerf_
  • Chain 'K':
    Compound: 5'-r(*ap*up*up*up*up*up*up*a)-3'
    Species: synthetic, synthetic
  • Heterogens: ADP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3rerA (A:)
    makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
    tvvps
    

    Sequence, based on observed residues (ATOM records): (download)
    >3rerA (A:)
    slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3rerB (B:)
    makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
    tvvps
    

    Sequence, based on observed residues (ATOM records): (download)
    >3rerB (B:)
    gqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
    ps
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3rerC (C:)
    makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
    tvvps
    

    Sequence, based on observed residues (ATOM records): (download)
    >3rerC (C:)
    akgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaist
    vvps
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3rerD (D:)
    makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
    tvvps
    

    Sequence, based on observed residues (ATOM records): (download)
    >3rerD (D:)
    qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
    s
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3rerE (E:)
    makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
    tvvps
    

    Sequence, based on observed residues (ATOM records): (download)
    >3rerE (E:)
    slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3rerF (F:)
    makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
    tvvps
    

    Sequence, based on observed residues (ATOM records): (download)
    >3rerF (F:)
    qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
    s
    

  • Chain 'K':
    No sequence available.