PDB entry 3r9k

View 3r9k on RCSB PDB site
Description: Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47asp mutant complexed with sulfate, a closed cap conformation
Class: hydrolase
Keywords: HYDROLASE, HOSPHOGLUCOMUTASE, PYROPHOSPHATASE, MAGNESIUM BINDING SITE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, ENZYME FUNCTION INITIATIVE, EFI, PSI-2, Protein Structure Initiative
Deposited on 2011-03-25, released 2011-04-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-11-16, with a file datestamp of 2011-11-11.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.191
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative Beta-phosphoglucomutase
    Species: Bacteroides thetaiotaomicron [TaxId:818]
    Gene: BT_2127
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8A5V9 (19-242)
      • expression tag (16-18)
      • engineered mutation (65)
    Domains in SCOPe 2.07: d3r9ka1, d3r9ka2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3r9kA (A:)
    gsshhhhhhssglvprgshmrkklkavlfdmdgvlfnsmpyhseawhqvmkthgldlsre
    eaymhdgrtgastinivfqrelgkeatqeeiesiyheksilfnsypeaermpgawellqk
    vksegltpmvvtgsgqlsllerlehnfpgmfhkelmvtafdvkygkpnpepylmalkkgg
    lkadeavvienaplgveaghkagiftiavntgpldgqvlldagadllfpsmqtlcdswdt
    iml
    

    Sequence, based on observed residues (ATOM records): (download)
    >3r9kA (A:)
    gshmrkklkavlfdmdgvlfnsmpyhseawhqvmkthgldlsreeaymhdgrtgastini
    vfqrelgkeatqeeiesiyheksilfnsypeaermpgawellqkvksegltpmvvtgsgq
    lsllerlehnfpgmfhkelmvtafdvkygkpnpepylmalkkgglkadeavvienaplgv
    eaghkagiftiavntgpldgqvlldagadllfpsmqtlcdswdtiml