PDB entry 3r52
View 3r52 on RCSB PDB site
Description: Structure analysis of a wound-inducible lectin ipomoelin from sweet potato
Class: Carbohydrate-binding protein
Keywords: beta prism, Carbohydrate/Sugar Binding, Carbohydrate-binding protein
Deposited on
2011-03-18, released
2012-03-28
The last revision prior to the SCOPe 2.07 freeze date was dated
2012-08-01, with a file datestamp of
2012-07-27.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.188
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ipomoelin
Species: Ipomoea batatas [TaxId:4120]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3r52a_ - Chain 'B':
Compound: Ipomoelin
Species: Ipomoea batatas [TaxId:4120]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3r52b_ - Chain 'C':
Compound: Ipomoelin
Species: Ipomoea batatas [TaxId:4120]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3r52c_ - Chain 'D':
Compound: Ipomoelin
Species: Ipomoea batatas [TaxId:4120]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3r52d_ - Heterogens: GYP, CD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3r52A (A:)
hhhhhhmalqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitf
ssnptdiitvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygp
yganagtpfnikipdgnkivgffgnsgwyvdaigayytak
Sequence, based on observed residues (ATOM records): (download)
>3r52A (A:)
lqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitfssnptdii
tvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygpyganagtp
fnikipdgnkivgffgnsgwyvdaigayytak
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3r52B (B:)
hhhhhhmalqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitf
ssnptdiitvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygp
yganagtpfnikipdgnkivgffgnsgwyvdaigayytak
Sequence, based on observed residues (ATOM records): (download)
>3r52B (B:)
alqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitfssnptdi
itvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygpyganagt
pfnikipdgnkivgffgnsgwyvdaigayytak
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3r52C (C:)
hhhhhhmalqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitf
ssnptdiitvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygp
yganagtpfnikipdgnkivgffgnsgwyvdaigayytak
Sequence, based on observed residues (ATOM records): (download)
>3r52C (C:)
lqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitfssnptdii
tvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygpyganagtp
fnikipdgnkivgffgnsgwyvdaigayytak
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3r52D (D:)
hhhhhhmalqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitf
ssnptdiitvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygp
yganagtpfnikipdgnkivgffgnsgwyvdaigayytak
Sequence, based on observed residues (ATOM records): (download)
>3r52D (D:)
lqlaahsdarsgpvgsnggqfwsfrpvrplnkivlsfsgspdqtlnlisitfssnptdii
tvggvgpepltytetvnidgdiieisgmianykgynvirsikfttnkkeygpyganagtp
fnikipdgnkivgffgnsgwyvdaigayytak