PDB entry 3r39

View 3r39 on RCSB PDB site
Description: Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica
Class: transport protein
Keywords: Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, D-alanine, ABC transporter, periplasmic protein, D-alanine transport, TRANSPORT PROTEIN
Deposited on 2011-03-15, released 2011-04-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-05-23, with a file datestamp of 2012-05-18.
Experiment type: XRAY
Resolution: 2.14 Å
R-factor: 0.203
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative periplasmic binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:588858]
    Gene: STM1633
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZPA3 (Start-232)
      • expression tag (233)
    Domains in SCOPe 2.06: d3r39a1, d3r39a2
  • Chain 'B':
    Compound: Putative periplasmic binding protein
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:588858]
    Gene: STM1633
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3r39b_
  • Heterogens: GLY, DAL, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3r39A (A:)
mvdsivegrtlnvavspasppmlfksadgklqgidlelfssycqsrhcklniteyawdgm
lgavasgqadvafsgisitdkrkkvidfsepyyinsfylvsmanhkitlnnlnelnkysi
gyprgmaysdlikndlepkgyyslskvklyptynetmadlkngnldlafieepvyftfkn
kkkmpiesryvfknvdqlgiafkkgspvrddfnlwlkeqgpqkisgivdswmkaenlyfq
shhhhhhwshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >3r39A (A:)
sivegrtlnvavspasppmlfksadgklqgidlelfssycqsrhcklniteyawdgmlga
vasgqadvafsgisitdkrkkvidfsepyyinsfylvsmanhkitlnnlnelnkysigyp
rgmaysdlikndlepkgyyslskvklyptynetmadlkngnldlafieepvyftfknkkk
mpiesryvfknvdqlgiafkkgspvrddfnlwlkeqgpqkisgivdswmka

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3r39B (B:)
mvdsivegrtlnvavspasppmlfksadgklqgidlelfssycqsrhcklniteyawdgm
lgavasgqadvafsgisitdkrkkvidfsepyyinsfylvsmanhkitlnnlnelnkysi
gyprgmaysdlikndlepkgyyslskvklyptynetmadlkngnldlafieepvyftfkn
kkkmpiesryvfknvdqlgiafkkgspvrddfnlwlkeqgpqkisgivdswmkaenlyfq
shhhhhhwshpqfek

    Sequence, based on observed residues (ATOM records): (download) 
    >3r39B (B:)
sivegrtlnvavspasppmlfksadgklqgidlelfssycqsrhcklniteyawdgmlga
vasgqadvafsgisitdkrkkvidfsepyyinsfylvsmanhkitlnnlnelnkysigyp
rgmaysdlikndlepkgyyslskvklyptynetmadlkngnldlafieepvyftfknkkk
mpiesryvfknvdqlgiafkkgspvrddfnlwlkeqgpqkisgivdswmk