PDB entry 3quv

View 3quv on RCSB PDB site
Description: Crystal structure of a tRNA-guanine-N1-methyltransferase from Mycobacterium abscessus
Class: transferase
Keywords: SSSGCID, Seattle Structural Genomics Center for Infectious Disease, SSGCID, tRNA methyltransferase, trmD, S-adenosyl-methionine, S-adenosyl-homocysteine, SAM, SAH, chronic lung disease, protein knot, 3(1) trefoil knot, domain swap, Transferase
Deposited on 2011-02-24, released 2011-03-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-04-22, with a file datestamp of 2015-04-17.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA (guanine-N(1)-)-methyltransferase
    Species: Mycobacterium abscessus [TaxId:561007]
    Gene: MAB_3226c, trmD
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1MDI3 (4-End)
      • expression tag (2-3)
    Domains in SCOPe 2.08: d3quva1, d3quva2
  • Chain 'B':
    Compound: tRNA (guanine-N(1)-)-methyltransferase
    Species: Mycobacterium abscessus [TaxId:561007]
    Gene: MAB_3226c, trmD
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1MDI3 (4-End)
      • expression tag (3)
    Domains in SCOPe 2.08: d3quvb1, d3quvb2
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3quvA (A:)
gpgsmkidvvtifpeylqpvrqslpgkaidaglvdvavhdlrrwthdvhksvddspyggg
pgmvmkptvwgdaldeictsetllvvptpagypftqetawqwstedhlviacgryegidq
rvaddaatrmrvrevsigdyvlnggeaaalviieavlrlvpgvlgnalsaqedshsegma
sllegpsytrppswrgmdvppvllsgdhakiaawraeqsrqrtierrpdllgfdsptgeh
ggdgls

    Sequence, based on observed residues (ATOM records): (download) 
    >3quvA (A:)
gsmkidvvtifpeylqpvrqslpgkaidaglvdvavhdlrrwthdvhksvddspygggpg
mvmkptvwgdaldeictsetllvvptpagypftqetawqwstedhlviacgryegidqrv
addaatrmrvrevsigdyvlnggeaaalviieavlrlvpgvlgnasllegpsytrppswr
gmdvppvllsgdhakiaawraeqsrqrtierrpdll

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3quvB (B:)
gpgsmkidvvtifpeylqpvrqslpgkaidaglvdvavhdlrrwthdvhksvddspyggg
pgmvmkptvwgdaldeictsetllvvptpagypftqetawqwstedhlviacgryegidq
rvaddaatrmrvrevsigdyvlnggeaaalviieavlrlvpgvlgnalsaqedshsegma
sllegpsytrppswrgmdvppvllsgdhakiaawraeqsrqrtierrpdllgfdsptgeh
ggdgls

    Sequence, based on observed residues (ATOM records): (download) 
    >3quvB (B:)
smkidvvtifpeylqpvrqslpgkaidaglvdvavhdlrrwthdvhksvddspygggpgm
vmkptvwgdaldeictsetllvvptpagypftqetawqwstedhlviacgryegidqrva
ddaatrmrvrevsigdyvlnggeaaalviieavlrlvpgvlgnalsaasllegpsytrpp
swrgmdvppvllsgdhakiaawraeqsrqrtierrpdllgfds