PDB entry 3qt9

View 3qt9 on RCSB PDB site
Description: Analysis of a new family of widely distributed metal-independent alpha mannosidases provides unique insight into the processing of N-linked glycans, Clostridium perfringens CPE0426 complexed with alpha-1,6-linked 1-thio-alpha-mannobiose
Class: hydrolase
Keywords: alpha-alpha six fold, glycoside hydrolase, mannosidase, hydrolase
Deposited on 2011-02-22, released 2011-03-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-05-11, with a file datestamp of 2011-05-06.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.16
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative uncharacterized protein CPE0426
    Species: Clostridium perfringens [TaxId:1502]
    Gene: CPE0426
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8XNB2
      • engineered mutation (158)
    Domains in SCOPe 2.07: d3qt9a_
  • Heterogens: EDO, YDR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qt9A (A:)
mslstnelkeivrkigkdlsgkiedkklqelfyncfintmdttvevsegdafvitgdipa
mwlrdstsqvehylpfvkeypelkaiftglinrqvkcifidpyanafnkepngqkwdndi
tkdspwvwerkyeidslcypvrlihkywkesgdetffnydikkafnmiidlwrveqyhre
ksdysfqrlncsvtdtlsheglgtpvtytgmtwsgfrpsddaceygylipanmfavvalr
yiseiaekvykdeelkekadslreeidnaiekhgkvykegfgevyayetdgmgnynfmdd
anvpsllsipyleykgiedevyqntrkfilsknnrfffegkaakgigsphtpdqyiwhia
lsmqglttnnqeeidqlikllketdagtgymhegfhvddptkftrdwfawsnslfshfiy
ekvinkk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qt9A (A:)
lstnelkeivrkigkdlsgkiedkklqelfyncfintmdttvevsegdafvitgdipamw
lrdstsqvehylpfvkeypelkaiftglinrqvkcifidpyanafnkepngqkwdnditk
dspwvwerkyeidslcypvrlihkywkesgdetffnydikkafnmiidlwrveqyhreks
dysfqrlncsvtdtlsheglgtpvtytgmtwsgfrpsddaceygylipanmfavvalryi
seiaekvykdeelkekadslreeidnaiekhgkvykegfgevyayetdgmgnynfmddan
vpsllsipyleykgiedevyqntrkfilsknnrfffegkaakgigsphtpdqyiwhials
mqglttnnqeeidqlikllketdagtgymhegfhvddptkftrdwfawsnslfshfiyek
vink