PDB entry 3qnr

View 3qnr on RCSB PDB site
Description: DyPB from Rhodococcus jostii RHA1, crystal form 1
Class: oxidoreductase
Keywords: peroxidase, lignan, heme, DyP, enzyme, OXIDOREDUCTASE
Deposited on 2011-02-09, released 2011-04-27
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-08-29, with a file datestamp of 2012-08-24.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.193
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DyP Peroxidase
    Species: Rhodococcus jostii RHA1 [TaxId:101510]
    Gene: DyPB, RHA1_ro02407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3qnra_
  • Chain 'B':
    Compound: DyP Peroxidase
    Species: Rhodococcus jostii RHA1 [TaxId:101510]
    Gene: DyPB, RHA1_ro02407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3qnrb_
  • Chain 'C':
    Compound: DyP Peroxidase
    Species: Rhodococcus jostii RHA1 [TaxId:101510]
    Gene: DyPB, RHA1_ro02407
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3qnrc_
  • Heterogens: HEM, FMT, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qnrA (A:)
gshmpgpvarlapqavltppsaaslflvlvagdsdddratvcdvisgidgplkavgfrel
agslscvvgvgaqfwdrvsasskpahlhpfvplsgpvhsapstpgdllfhikaarkdlcf
elgrqivsalgsaatvvdevhgfryfdsrdllgfvdgtenptdddaadsaligdedpdfr
ggsyvivqkylhdmsawntlsteeqervigrtklenveldddaqpsnshvtlntivdddg
vehdilrdnmafgslgeaeygtyfigyakdpavtelmlrrmflgeppgnydrvldfstaa
tgtlffvpsrdvleslgdepagaesapedpvepaaagpydlslkigglkgvsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3qnrA (A:)
arlapqavltppsaaslflvlvagdsdddratvcdvisgidgplkavgfrelagslscvv
gvgaqfwdrvsasskpahlhpfvplsgpvhsapstpgdllfhikaarkdlcfelgrqivs
algsaatvvdevhgfryfdsrdllgfvdgtenptdddaadsaligdedpdfrggsyvivq
kylhdmsawntlsteeqervigrtklenveldddaqpsnshvtlntivdddgvehdilrd
nmafgslgeaeygtyfigyakdpavtelmlrrmflgeppgnydrvldfstaatgtlffvp
srdvlesl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qnrB (B:)
gshmpgpvarlapqavltppsaaslflvlvagdsdddratvcdvisgidgplkavgfrel
agslscvvgvgaqfwdrvsasskpahlhpfvplsgpvhsapstpgdllfhikaarkdlcf
elgrqivsalgsaatvvdevhgfryfdsrdllgfvdgtenptdddaadsaligdedpdfr
ggsyvivqkylhdmsawntlsteeqervigrtklenveldddaqpsnshvtlntivdddg
vehdilrdnmafgslgeaeygtyfigyakdpavtelmlrrmflgeppgnydrvldfstaa
tgtlffvpsrdvleslgdepagaesapedpvepaaagpydlslkigglkgvsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3qnrB (B:)
arlapqavltppsaaslflvlvagdsdddratvcdvisgidgplkavgfrelagslscvv
gvgaqfwdrvsasskpahlhpfvplsgpvhsapstpgdllfhikaarkdlcfelgrqivs
algsaatvvdevhgfryfdsrdllgfvdgtenptdddaadsaligdedpdfrggsyvivq
kylhdmsawntlsteeqervigrtklenveldddaqpsnshvtlntivdddgvehdilrd
nmafgslgeaeygtyfigyakdpavtelmlrrmflgeppgnydrvldfstaatgtlffvp
srdvleslg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qnrC (C:)
gshmpgpvarlapqavltppsaaslflvlvagdsdddratvcdvisgidgplkavgfrel
agslscvvgvgaqfwdrvsasskpahlhpfvplsgpvhsapstpgdllfhikaarkdlcf
elgrqivsalgsaatvvdevhgfryfdsrdllgfvdgtenptdddaadsaligdedpdfr
ggsyvivqkylhdmsawntlsteeqervigrtklenveldddaqpsnshvtlntivdddg
vehdilrdnmafgslgeaeygtyfigyakdpavtelmlrrmflgeppgnydrvldfstaa
tgtlffvpsrdvleslgdepagaesapedpvepaaagpydlslkigglkgvsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3qnrC (C:)
arlapqavltppsaaslflvlvagdsdddratvcdvisgidgplkavgfrelagslscvv
gvgaqfwdrvsasskpahlhpfvplsgpvhsapstpgdllfhikaarkdlcfelgrqivs
algsaatvvdevhgfryfdsrdllgfvdgtenptdddaadsaligdedpdfrggsyvivq
kylhdmsawntlsteeqervigrtklenveldddaqpsnshvtlntivdddgvehdilrd
nmafgslgeaeygtyfigyakdpavtelmlrrmflgeppgnydrvldfstaatgtlffvp
srdvlesl