PDB entry 3qjn

View 3qjn on RCSB PDB site
Description: Structural flexibility of Shank PDZ domain is important for its binding to different ligands
Class: protein binding
Keywords: PDZ domain, Protein-protein interaction, Beta-PIX, PROTEIN BINDING
Deposited on 2011-01-30, released 2011-04-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-04-18, with a file datestamp of 2012-04-13.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: 0.217
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjna_
  • Chain 'B':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjnb_
  • Chain 'C':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjnc_
  • Chain 'D':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjnd_
  • Chain 'E':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjne_
  • Chain 'F':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjnf_
  • Chain 'G':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjng_
  • Chain 'H':
    Compound: SH3 and multiple ankyrin repeat domains protein 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: shank1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qjnh_
  • Chain 'I':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'J':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'K':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'L':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'M':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'N':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'O':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Chain 'P':
    Compound: Beta-PIX
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 3QJN (Start-6)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qjnA (A:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnA (A:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qjnB (B:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnB (B:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qjnC (C:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnC (C:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3qjnD (D:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnD (D:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3qjnE (E:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnE (E:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3qjnF (F:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnF (F:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3qjnG (G:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnG (G:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3qjnH (H:)
gsdyiikektvllqkkdsegfgfvlrgakaqtpieeftptpafpalqylesvdeggvawr
aglrmgdflievngqnvvkvghrqvvnmirqggntlmvkvvmvtrhpdmdeavhk

    Sequence, based on observed residues (ATOM records): (download) 
    >3qjnH (H:)
dyiikektvllqkkdsegfgfvlrgaieeftptpafpalqylesvdeggvawraglrmgd
flievngqnvvkvghrqvvnmirqggntlmvkvvmvtr

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.

  • Chain 'O':
    No sequence available.

  • Chain 'P':
    No sequence available.