PDB entry 3qid

View 3qid on RCSB PDB site
Description: Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
Class: transferase
Keywords: RNA polymerase, viral replication enzyme, transferase
Deposited on 2011-01-27, released 2011-12-21
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-12-21, with a file datestamp of 2011-12-16.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.202
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA dependent RNA polymerase
    Species: Murine norovirus 1 [TaxId:223997]
    Gene: MNV RdRp
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3qida_
  • Chain 'B':
    Compound: RNA dependent RNA polymerase
    Species: Murine norovirus 1 [TaxId:223997]
    Gene: MNV RdRp
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3qidb_
  • Chain 'C':
    Compound: RNA dependent RNA polymerase
    Species: Murine norovirus 1 [TaxId:223997]
    Gene: MNV RdRp
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3qidc_
  • Heterogens: SO4, MN3, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qidA (A:)
mlprpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslq
qvmrdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssg
ypyhkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkik
krllwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmd
adytrwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglps
gcpcttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytm
alrrygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkg
pnhqnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrs
vlrwvrfgtmdaetpqersavfvnedaaalehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3qidA (A:)
rpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqqvm
rdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgypy
hkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikkrl
lwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmdady
trwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsgcp
cttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytmalr
rygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgpnh
qnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrsvlr
wvrfgtmdaetp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qidB (B:)
mlprpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslq
qvmrdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssg
ypyhkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkik
krllwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmd
adytrwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglps
gcpcttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytm
alrrygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkg
pnhqnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrs
vlrwvrfgtmdaetpqersavfvnedaaalehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3qidB (B:)
rpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqqvm
rdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgypy
hkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikkrl
lwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmdady
trwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsgcp
cttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytmalr
rygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgpnh
qnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrsvlr
wvrfgtmdaetp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qidC (C:)
mlprpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslq
qvmrdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssg
ypyhkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkik
krllwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmd
adytrwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglps
gcpcttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytm
alrrygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkg
pnhqnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrs
vlrwvrfgtmdaetpqersavfvnedaaalehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3qidC (C:)
rpsgtyaglpiadygdapplstktmfwrtspeklppgawepaylgskdervdgpslqqvm
rdqlkpyseprgllppqeildavcdaienrlentlepqkpwtfkkacesldkntssgypy
hkqkskdwtgsafigdlgdqathannmyemgksmrpiytaalkdelvkpdkiygkikkrl
lwgsdlgtmiraarafgpfcdalketcifnpirvgmsmnedgpfifarhanfryhmdady
trwdstqqrailkragdimvrlspepdlarvvmddllapslldvgdykivveeglpsgcp
cttqlnslahwiltlcamvevtrvdpdivmqesefsfygddevvstnleldmvkytmalr
rygllptradkeegplerrqtlqgisflrraivgdqfgwygrldrasidrqllwtkgpnh
qnpfetlpghaqrpsqlmallgeaamhgekyyrtvasrvskeaaqsgiemvvprhrsvlr
wvrfgtmdaetp