PDB entry 3qdj
View 3qdj on RCSB PDB site
Description: The complex between TCR DMF5 and human Class I MHC HLA-A2 with the bound MART-1(27-35) nonameric peptide
Class: immune system
Keywords: MART-1 peptide, nonapeptide, MHC class I, HLA-A2, TCR DMF5, TCR DMF4, cross-reactivity, cancer, melanoma, IMMUNE SYSTEM
Deposited on
2011-01-18, released
2011-07-06
The last revision prior to the SCOPe 2.02 freeze date was dated
2011-09-07, with a file datestamp of
2011-09-02.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.243
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HLA class I histocompatibility antigen, A-2 alpha chain
Species: Homo sapiens [TaxId:9606]
Gene: HLA-A, HLAA
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-99)
- initiating methionine (0)
Domains in SCOPe 2.02: d3qdjb_ - Chain 'C':
Compound: MART-1(27-35) peptide
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: DMF5 alpha chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: DMF5 beta chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH