PDB entry 3qby

View 3qby on RCSB PDB site
Description: Crystal structure of the PWWP domain of human Hepatoma-derived growth factor 2
Class: protein binding
Keywords: hdgf2, structural genomics consortium, SGC, PROTEIN BINDING
Deposited on 2011-01-14, released 2011-02-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hepatoma-derived growth factor-related protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: HDGFRP2, HDGF2, UNQ785/PRO1604
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qbya_
  • Chain 'B':
    Compound: Hepatoma-derived growth factor-related protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: HDGFRP2, HDGF2, UNQ785/PRO1604
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qbyb_
  • Chain 'C':
    Compound: Hepatoma-derived growth factor-related protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: HDGFRP2, HDGF2, UNQ785/PRO1604
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3qbyc_
  • Chain 'H':
    Compound: H4K20me3 Histone H4 Peptide
    Species: synthetic, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 3QBY
  • Heterogens: UNX, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qbyA (A:)
gmphafkpgdlvfakmkgyphwpariddiadgavkpppnkypifffgthetaflgpkdlf
pydkckdkygkpnkrkgfneglweiqnnphasys

    Sequence, based on observed residues (ATOM records): (download) 
    >3qbyA (A:)
mphafkpgdlvfakmkgyphwpariddiadgavkpppnkypifffgthetaflgpkdlfp
ydkckdkygkpnkrkgfneglweiqnnphasys

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qbyB (B:)
gmphafkpgdlvfakmkgyphwpariddiadgavkpppnkypifffgthetaflgpkdlf
pydkckdkygkpnkrkgfneglweiqnnphasys

    Sequence, based on observed residues (ATOM records): (download) 
    >3qbyB (B:)
afkpgdlvfakmkgyphwpariddpppnkypifffgthetaflgpkdlfpydkckdkygk
pnkrkgfneglweiqnnphasys

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qbyC (C:)
gmphafkpgdlvfakmkgyphwpariddiadgavkpppnkypifffgthetaflgpkdlf
pydkckdkygkpnkrkgfneglweiqnnphasys

    Sequence, based on observed residues (ATOM records): (download) 
    >3qbyC (C:)
fkpgdlvfakmkgyphwparidppnkypifffgthetaflgpkdlfpydkckdkygkpnk
rkgfneglweiqnnph

  • Chain 'H':
    No sequence available.