PDB entry 3qbq

View 3qbq on RCSB PDB site
Description: Crystal structure of extracellular domains of mouse RANK-RANKL complex
Class: cytokine/cytokine receptor
Keywords: tumor necrosis factor (TNF) Ligand-receptor superfamily fold, cytokine-cytokine receptor complex
Deposited on 2011-01-13, released 2011-03-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-03-02, with a file datestamp of 2011-02-25.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.227
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tumor necrosis factor ligand superfamily member 11
    Species: Mus musculus [TaxId:10090]
    Gene: RANKL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3qbqa_
  • Chain 'B':
    Compound: Tumor necrosis factor receptor superfamily member 11A
    Species: Mus musculus [TaxId:10090]
    Gene: RANK
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: tumor necrosis factor ligand superfamily member 11
    Species: Mus musculus [TaxId:10090]
    Gene: RANKL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3qbqc_
  • Chain 'D':
    Compound: Tumor necrosis factor receptor superfamily member 11A
    Species: Mus musculus [TaxId:10090]
    Gene: RANK
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qbqA (A:)
gkpeaqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyyly
anicfrhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinv
ggffklrageeisiqvsnpslldpdqdatyfgafkvqdid

    Sequence, based on observed residues (ATOM records): (download) 
    >3qbqA (A:)
aqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyylyanic
frhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinvggff
klrageeisiqvsnpslldpdqdatyfgafkvqdi

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qbqC (C:)
gkpeaqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyyly
anicfrhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinv
ggffklrageeisiqvsnpslldpdqdatyfgafkvqdid

    Sequence, based on observed residues (ATOM records): (download) 
    >3qbqC (C:)
aqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyylyanic
frhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinvggff
klrageeisiqvsnpslldpdqdatyfgafkvqdi

  • Chain 'D':
    No sequence available.