PDB entry 3q1s
View 3q1s on RCSB PDB site
Description: HIV-1 neutralizing antibody Z13e1 in complex with epitope display protein
Class: immune system/cytokine
Keywords: immunoglobulin fold, antibody, gp41, IMMUNE SYSTEM-CYTOKINE complex
Deposited on
2010-12-17, released
2011-11-02
The last revision prior to the SCOPe 2.06 freeze date was dated
2012-01-11, with a file datestamp of
2012-01-06.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.21
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: Z13e1 Fab heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Interleukin-22
Species: Homo sapiens [TaxId:9606]
Gene: IL22, ILTIF, ZCYTO18, UNQ3099/PRO10096
Database cross-references and differences (RAF-indexed):
- Uniprot Q9GZX6 (Start-150)
- engineered mutation (35-37)
- engineered mutation (39-40)
Domains in SCOPe 2.06: d3q1si_ - Chain 'L':
Compound: Z13e1 Fab light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3q1sl1, d3q1sl2 - Heterogens: IPA, GOL, HOH
PDB Chain Sequences:
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>3q1sI (I:)
qggaaapisshcrldksnfqqpyitnrtfmlakeawnwdditdvrligeklfhgvsmser
cylmkqvlnftleevlfpqsdrfqpymqevvpflarlsnrlstchiegddlhiqrnvqkl
kdtvkklgesgeikaigeldllfmslrnaci
Sequence, based on observed residues (ATOM records): (download)
>3q1sI (I:)
crldksnmlakeawnwdditdvrligeklfhgvsmsercylmkqvlnftleevpflarls
nrlstchiegddlhiqrnvqklkdtvkklgesgeikaigeldllfmslrnaci
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3q1sL (L:)
eltqspatlslspgeratlscrasqsvgrnlgwyqqkpgqaprlliydasnratgiparf
sgsgsgtdftltisslepedfavyycqarlllpqtfgqgtkveikrtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>3q1sL (L:)
eltqspatlslspgeratlscrasqsvgrnlgwyqqkpgqaprlliydasnratgiparf
sgsgsgtdftltisslepedfavyycqarlllpqtfgqgtkveikrtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnr