PDB entry 3pvj

View 3pvj on RCSB PDB site
Description: Crystal structure of the Fe(II)/alpha-ketoglutarate dependent taurine dioxygenase from Pseudomonas putida KT2440
Class: oxidoreductase
Keywords: jelly roll motif, dioxygenase, Fe(II) binding, Oxidoreductase
Deposited on 2010-12-07, released 2011-12-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alpha-Ketoglutarate-Dependent Taurine Dioxygenase
    Species: Pseudomonas putida KT2440 [TaxId:160488]
    Gene: PP0230, PP_0230, tauD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pvja_
  • Chain 'B':
    Compound: Alpha-Ketoglutarate-Dependent Taurine Dioxygenase
    Species: Pseudomonas putida KT2440 [TaxId:160488]
    Gene: PP0230, PP_0230, tauD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pvjb_
  • Chain 'C':
    Compound: Alpha-Ketoglutarate-Dependent Taurine Dioxygenase
    Species: Pseudomonas putida KT2440 [TaxId:160488]
    Gene: PP0230, PP_0230, tauD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pvjc_
  • Chain 'D':
    Compound: Alpha-Ketoglutarate-Dependent Taurine Dioxygenase
    Species: Pseudomonas putida KT2440 [TaxId:160488]
    Gene: PP0230, PP_0230, tauD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pvjd_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3pvjA (A:)
msltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaa
rfgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpay
ggdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnp
plshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqe
ndvafwdnrvtqhfavddyrpnrrvmhratilgdapf

    Sequence, based on observed residues (ATOM records): (download) 
    >3pvjA (A:)
ltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaarf
gdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpaygg
dtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnppl
shpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqend
vafwdnrvtqhfavddyrpnrrvmhratilgdapf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3pvjB (B:)
msltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaa
rfgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpay
ggdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnp
plshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqe
ndvafwdnrvtqhfavddyrpnrrvmhratilgdapf

    Sequence, based on observed residues (ATOM records): (download) 
    >3pvjB (B:)
sltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaar
fgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpayg
gdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnpp
lshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqen
dvafwdnrvtqhfavddyrpnrrvmhratilgdapf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3pvjC (C:)
msltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaa
rfgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpay
ggdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnp
plshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqe
ndvafwdnrvtqhfavddyrpnrrvmhratilgdapf

    Sequence, based on observed residues (ATOM records): (download) 
    >3pvjC (C:)
sltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaar
fgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpayg
gdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnpp
lshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqen
dvafwdnrvtqhfavddyrpnrrvmhratilgdapf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3pvjD (D:)
msltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaa
rfgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpay
ggdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnp
plshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqe
ndvafwdnrvtqhfavddyrpnrrvmhratilgdapf

    Sequence, based on observed residues (ATOM records): (download) 
    >3pvjD (D:)
sltitplspalgaqisgvdisrdisaeerdaieqallqhqvlflrdqpinpeqqarfaar
fgdlhihpiypnvpdtpqvlvldtavtdvrdnavwhtdvtflptpalgavlsakqlpayg
gdtlwasgiaafealsaplremldgltathdftksfplerfgttpqdlarweatrrnnpp
lshpvvrthpvsgrkalfvnegfttrinelselesdallrllfahatrpefsirwrwqen
dvafwdnrvtqhfavddyrpnrrvmhratilgdapf