PDB entry 3pms

View 3pms on RCSB PDB site
Description: Recombinant peptide: N-glycanase F (PNGase F)
Class: hydrolase
Keywords: Jelly Roll Fold, N-Glycanase, HYDROLASE
Deposited on 2010-11-17, released 2011-01-26
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-01-26, with a file datestamp of 2011-01-21.
Experiment type: XRAY
Resolution: 1.57 Å
R-factor: 0.152
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide:N-glycosidase F
    Species: Elizabethkingia meningoseptica [TaxId:238]
    Gene: png
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XBM8 (Start-316)
      • expression tag (317)
    Domains in SCOPe 2.04: d3pmsa1, d3pmsa2
  • Heterogens: SO4, GOL, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3pmsA (A:)
gipapadntvniktfdkvknafgdglsqsaegtftfpadvtavktikmfiknecpnktcd
ewdryanvyvknkttgewyeigrfitpywvgteklprgleidvtdfksllsgntelkiyt
etwlakgreysvdfdivygtpdykysavvpvvqynkssidgvpygkahtlalkkniqlpt
ntekaylrttisgwghakpydagsrgcaewcfrthtiainnsntfqhqlgalgcsanpin
nqspgnwtpdragwcpgmavptridvlnnsligstfsyeykfqnwtnngtngdafyaiss
fviaksntpisapvvtnldphhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3pmsA (A:)
dntvniktfdkvknafgdglsqsaegtftfpadvtavktikmfiknecpnktcdewdrya
nvyvknkttgewyeigrfitpywvgteklprgleidvtdfksllsgntelkiytetwlak
greysvdfdivygtpdykysavvpvvqynkssidgvpygkahtlalkkniqlptntekay
lrttisgwghakpydagsrgcaewcfrthtiainnsntfqhqlgalgcsanpinnqspgn
wtpdragwcpgmavptridvlnnsligstfsyeykfqnwtnngtngdafyaissfviaks
ntpisapvvtnl