PDB entry 3pk0

View 3pk0 on RCSB PDB site
Description: Crystal structure of Short-chain dehydrogenase/reductase SDR from Mycobacterium smegmatis
Class: oxidoreductase
Keywords: SSGCID, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, OXIDOREDUCTASE
Deposited on 2010-11-10, released 2010-11-24
The last revision prior to the SCOPe 2.03 freeze date was dated 2010-11-24, with a file datestamp of 2010-11-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.152
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Short-chain dehydrogenase/reductase SDR
    Species: Mycobacterium smegmatis [TaxId:246196]
    Gene: MSMEG_0779
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0QQJ6 (4-261)
      • expression tag (2-3)
    Domains in SCOPe 2.03: d3pk0a_
  • Chain 'B':
    Compound: Short-chain dehydrogenase/reductase SDR
    Species: Mycobacterium smegmatis [TaxId:246196]
    Gene: MSMEG_0779
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0QQJ6 (4-261)
      • expression tag (0-3)
    Domains in SCOPe 2.03: d3pk0b_
  • Chain 'C':
    Compound: Short-chain dehydrogenase/reductase SDR
    Species: Mycobacterium smegmatis [TaxId:246196]
    Gene: MSMEG_0779
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0QQJ6 (4-261)
      • expression tag (0-3)
    Domains in SCOPe 2.03: d3pk0c_
  • Chain 'D':
    Compound: Short-chain dehydrogenase/reductase SDR
    Species: Mycobacterium smegmatis [TaxId:246196]
    Gene: MSMEG_0779
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0QQJ6 (4-261)
      • expression tag (3)
    Domains in SCOPe 2.03: d3pk0d_
  • Heterogens: PEG, CA, CL, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3pk0A (A:)
gpgsmfdlqgrsvvvtggtkgigrgiatvfaraganvavagrstadidacvadldqlgsg
kvigvqtdvsdraqcdalagraveefggidvvcanagvfpdaplatmtpeqlngifavnv
ngtfyavqacldaliasgsgrvvltssitgpitgypgwshygatkaaqlgfmrtaaiela
phkitvnaimpgnimtegllengeeyiasmarsipagalgtpedighlaaflatkeagyi
tgqaiavdggqvlpesldaiat

    Sequence, based on observed residues (ATOM records): (download) 
    >3pk0A (A:)
gsmfdlqgrsvvvtggtkgigrgiatvfaraganvavagrstadidacvadldqlgsgkv
igvqtdvsdraqcdalagraveefggidvvcanagvfpdaplatmtpeqlngifavnvng
tfyavqacldaliasgsgrvvltssitgpitgypgwshygatkaaqlgfmrtaaielaph
kitvnaimpgnimtegllengeeyiasmarsipagalgtpedighlaaflatkeagyitg
qaiavdggqvlpesldaiat

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pk0B (B:)
gpgsmfdlqgrsvvvtggtkgigrgiatvfaraganvavagrstadidacvadldqlgsg
kvigvqtdvsdraqcdalagraveefggidvvcanagvfpdaplatmtpeqlngifavnv
ngtfyavqacldaliasgsgrvvltssitgpitgypgwshygatkaaqlgfmrtaaiela
phkitvnaimpgnimtegllengeeyiasmarsipagalgtpedighlaaflatkeagyi
tgqaiavdggqvlpesldaiat

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pk0C (C:)
gpgsmfdlqgrsvvvtggtkgigrgiatvfaraganvavagrstadidacvadldqlgsg
kvigvqtdvsdraqcdalagraveefggidvvcanagvfpdaplatmtpeqlngifavnv
ngtfyavqacldaliasgsgrvvltssitgpitgypgwshygatkaaqlgfmrtaaiela
phkitvnaimpgnimtegllengeeyiasmarsipagalgtpedighlaaflatkeagyi
tgqaiavdggqvlpesldaiat

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3pk0D (D:)
gpgsmfdlqgrsvvvtggtkgigrgiatvfaraganvavagrstadidacvadldqlgsg
kvigvqtdvsdraqcdalagraveefggidvvcanagvfpdaplatmtpeqlngifavnv
ngtfyavqacldaliasgsgrvvltssitgpitgypgwshygatkaaqlgfmrtaaiela
phkitvnaimpgnimtegllengeeyiasmarsipagalgtpedighlaaflatkeagyi
tgqaiavdggqvlpesldaiat

    Sequence, based on observed residues (ATOM records): (download) 
    >3pk0D (D:)
smfdlqgrsvvvtggtkgigrgiatvfaraganvavagrstadidacvadldqlgsgkvi
gvqtdvsdraqcdalagraveefggidvvcanagvfpdaplatmtpeqlngifavnvngt
fyavqacldaliasgsgrvvltssitgpitgypgwshygatkaaqlgfmrtaaielaphk
itvnaimpgnimtegllengeeyiasmarsipagalgtpedighlaaflatkeagyitgq
aiavdggqvlpesldaiat