PDB entry 3pf5

View 3pf5 on RCSB PDB site
Description: Crystal structure of Bs-CspB in complex with rU6
Class: gene regulation/RNA
Keywords: BETA BARREL, PROTEIN-RNA complex, COLD SHOCK RESPONSE, TRANSCRIPTION REGULATION, TRANSLATION REGULATION, OB fold, cold shock domain, RNA/DNA binding, single-stranded RNA and DNA, cytosol, GENE REGULATION-RNA complex
Deposited on 2010-10-27, released 2011-09-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-12-28, with a file datestamp of 2011-12-23.
Experiment type: XRAY
Resolution: 1.68 Å
R-factor: 0.183
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Cold shock protein cspB
  Species: Bacillus subtilis [TaxId:1423]
  Gene: BSU09100, cspA, cspB
  Database cross-references and differences (RAF-indexed):
  • Uniprot P32081 (0-End)
  Domains in SCOPe 2.08: d3pf5a_
• Chain 'B':
  Compound: Cold shock protein cspB
  Species: Bacillus subtilis [TaxId:1423]
  Gene: BSU09100, cspA, cspB
  Database cross-references and differences (RAF-indexed):
  • Uniprot P32081 (0-66)
  Domains in SCOPe 2.08: d3pf5b_
• Chain 'R':
  Compound: hexaribouracil (rU6)
  Species: synthetic, synthetic
  
• Chain 'S':
  Compound: hexaribouracil (rU6)
  Species: synthetic, synthetic
  
• Heterogens: MG, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >3pf5A (A:)
  mlegkvkwfnsekgfgfievegqddvfvhfsaiqgegfktleegqavsfeivegnrgpqa
  anvtkea
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3pf5A (A:)
  mlegkvkwfnsekgfgfievegqddvfvhfsaiqgegfktleegqavsfeivegnrgpqa
  anvtke
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3pf5B (B:)
  mlegkvkwfnsekgfgfievegqddvfvhfsaiqgegfktleegqavsfeivegnrgpqa
  anvtkea
  

  
  
• Chain 'R':
  No sequence available.
  
  
• Chain 'S':
  No sequence available.