PDB entry 3pdv

View 3pdv on RCSB PDB site
Description: Structure of the PDlim2 PDZ domain in complex with the C-terminal 6-peptide extension of NS1
Class: protein binding
Keywords: PDZ, extension, protein interaction, X-S/T-X-V motif, PROTEIN BINDING
Deposited on 2010-10-25, released 2011-09-07
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-09-07, with a file datestamp of 2011-09-02.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.2
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PDZ and LIM domain protein 2, C-teminal peptide from Nonstructural protein 1
    Species: Homo sapiens, Influenza A virus [TaxId:9606, 319102]
    Gene: PDLIM2, NS1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3pdva_
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pdvA (A:)
maltvdvagpapwgfritggrdfhtpimvtkvaergkakdadlrpgdiivaingesaegm
lhaeaqskirqspsplrlqldrstiesev