PDB entry 3pdb

View 3pdb on RCSB PDB site
Description: Crystal structure of mouse mitochondrial aspartate aminotransferase in complex with oxaloacetic acid
Class: transferase
Keywords: alpha & beta protein, aminotransferase, PLP-binding, Mitochondrion, TRANSFERASE
Deposited on 2010-10-22, released 2010-11-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-05-11, with a file datestamp of 2011-05-06.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.178
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: GOT2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pdba_
  • Chain 'B':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: GOT2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pdbb_
  • Chain 'C':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: GOT2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pdbc_
  • Chain 'D':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: GOT2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pdbd_
  • Heterogens: BME, GOL, OAA, PMP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pdbA (A:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pdbB (B:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pdbC (C:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pdbD (D:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk