PDB entry 3pd6

View 3pd6 on RCSB PDB site
Description: Crystal structure of mouse mitochondrial aspartate aminotransferase, a newly identified kynurenine aminotransferase-IV
Class: transferase
Keywords: alpha & beta protein, aminotransferase, PLP-binding, Mitochondrion, TRANSFERASE
Deposited on 2010-10-22, released 2010-11-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-05-11, with a file datestamp of 2011-05-06.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.178
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Got-2, Got2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pd6a_
  • Chain 'B':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Got-2, Got2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pd6b_
  • Chain 'C':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Got-2, Got2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pd6c_
  • Chain 'D':
    Compound: Aspartate aminotransferase, mitochondrial
    Species: Mus musculus [TaxId:10090]
    Gene: Got-2, Got2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3pd6d_
  • Heterogens: PMP, GOL, KYN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pd6A (A:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pd6B (B:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pd6C (C:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3pd6D (D:)
sswwthvemgppdpilgvteafkrdtnskkmnlgvgayrddngkpyvlpsvrkaeaqiaa
knldkeylpigglaefckasaelalgennevlksgrfvtvqtisgtgalrvgasflqrff
kfsrdvflpkpswgnhtpifrdagmqlqgyryydpktcgfdfsgalediskipeqsvlll
hacahnptgvdprpeqwkeiasvvkkknlfaffdmayqgfasgdgdkdawavrhfieqgi
nvclcqsyaknmglygervgaftvvckdaeeakrvesqlkilirplysnpplngariaat
iltspdlrkqwlqevkgmadriismrtqlvsnlkkegsshnwqhitdqigmfcftglkpe
qverltkefsvymtkdgrisvagvtsgnvgylahaihqvtk