PDB entry 3p5i
View 3p5i on RCSB PDB site
Description: Structure of the carbohydrate-recognition domain of human Langerin with 6-SO4-Gal-GlcNAc
Class: sugar binding protein
Keywords: C-type lectin, carbohydrate-binding, SUGAR BINDING PROTEIN
Deposited on
2010-10-08, released
2010-12-08
The last revision prior to the SCOPe 2.02 freeze date was dated
2011-01-26, with a file datestamp of
2011-01-21.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.181
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: C-type lectin domain family 4 member K
Species: Homo sapiens [TaxId:9606]
Gene: CD207, CLEC4K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d3p5ia_ - Chain 'B':
Compound: C-type lectin domain family 4 member K
Species: Homo sapiens [TaxId:9606]
Gene: CD207, CLEC4K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d3p5ib_ - Chain 'C':
Compound: C-type lectin domain family 4 member K
Species: Homo sapiens [TaxId:9606]
Gene: CD207, CLEC4K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d3p5ic_ - Chain 'D':
Compound: C-type lectin domain family 4 member K
Species: Homo sapiens [TaxId:9606]
Gene: CD207, CLEC4K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d3p5id_ - Heterogens: CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3p5iA (A:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep
Sequence, based on observed residues (ATOM records): (download)
>3p5iA (A:)
gwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltk
agmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflf
ickrpyvp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3p5iB (B:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep
Sequence, based on observed residues (ATOM records): (download)
>3p5iB (B:)
gwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltk
agmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflf
ickrpyvp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3p5iC (C:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep
Sequence, based on observed residues (ATOM records): (download)
>3p5iC (C:)
qgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywiglt
kagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktfl
fickrpyvp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3p5iD (D:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep
Sequence, based on observed residues (ATOM records): (download)
>3p5iD (D:)
qgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywiglt
kagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktfl
fickrpyvp