PDB entry 3p5g

View 3p5g on RCSB PDB site
Description: Structure of the carbohydrate-recognition domain of human Langerin with Blood group B trisaccharide (Gal alpha1-3(Fuc alpha1-2)Gal)
Class: sugar binding protein
Keywords: C-type lectin, carbohydrate-binding, SUGAR BINDING PROTEIN
Deposited on 2010-10-08, released 2010-12-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-01-26, with a file datestamp of 2011-01-21.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.181
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3p5ga_
  • Chain 'B':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3p5gb_
  • Chain 'C':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3p5gc_
  • Chain 'D':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3p5gd_
  • Heterogens: CA, FUC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3p5gA (A:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep

    Sequence, based on observed residues (ATOM records): (download) 
    >3p5gA (A:)
gwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltk
agmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflf
ickrpyvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3p5gB (B:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep

    Sequence, based on observed residues (ATOM records): (download) 
    >3p5gB (B:)
gwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltk
agmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflf
ickrpyvp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3p5gC (C:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep

    Sequence, based on observed residues (ATOM records): (download) 
    >3p5gC (C:)
qgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywiglt
kagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktfl
fickrpyvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3p5gD (D:)
qvvsqgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliyw
igltkagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcd
ktflfickrpyvpsep

    Sequence, based on observed residues (ATOM records): (download) 
    >3p5gD (D:)
qgwkyfkgnfyyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywiglt
kagmegdwswvddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktfl
fickrpyvp