PDB entry 3oxr

View 3oxr on RCSB PDB site
Description: Crystal Structure of HLA A*02:06 Bound to HBV Core 18-27
Class: immune system
Keywords: Protein-Peptide Complex, Host-virus interaction, Immunogenicity, Therapeutic Design, TCR Recognition, Helix, Beta-sheet, Antigen Presentation, Peptide Binding, Cell Surface, IMMUNE SYSTEM
Deposited on 2010-09-21, released 2011-05-04
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-06, with a file datestamp of 2011-07-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.179
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MHC class I antigen
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-A, MHC HLA-A*02:06
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M, BETA 2-MICROGLOBULIN, CDABP0092, HDCMA22P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (1-99)
      • initiating methionine (0)
    Domains in SCOPe 2.02: d3oxrb_
  • Chain 'C':
    Compound: 10mer peptide from Pre-core-protein
    Species: Hepatitis B virus, synthetic [TaxId:10407]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3oxrB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

  • Chain 'C':
    No sequence available.