PDB entry 3ov6

View 3ov6 on RCSB PDB site
Description: CD1c in complex with MPM (mannosyl-beta1-phosphomycoketide)
Class: immune system
Keywords: MHC, Immunoglobulin Domain, Immune System, Antigen Presentation
Deposited on 2010-09-15, released 2011-01-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-2-microglobulin, T-cell surface glycoprotein CD1c, T-cell surface glycoprotein CD1b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (3-101)
      • expression tag (2)
      • linker (102-105)
    • Uniprot P29017 (Start-299)
      • engineered mutation (168)
      • engineered mutation (173)
      • engineered mutation (224)
      • engineered mutation (244)
    • Uniprot P29016 (300-394)
      • engineered mutation (357-358)
      • expression tag (395-396)
    Domains in SCOPe 2.08: d3ov6a1, d3ov6a2, d3ov6a3, d3ov6a4, d3ov6a5
  • Heterogens: NAG, D12, MK0, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ov6A (A:)
adpiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfs
kdwsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmggggsggsgsgggssada
sqehvsfhviqifsfvnqswargqgsgwldelqthgwdsesgtiiflhqwskgqfsneel
sdlellfrfylfgltreiqdhasqdyskypfevqvkagcelhsggspegffqvafngldl
lsfqqttwvpspgcgslaqsvchllnhqyegvtetvynlirstcprfllglldagkmyvh
rqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnaqgt
wylratldvadgeaaglscrvkhsslegqdiilywhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ov6A (A:)
piqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmggggehvsfhviqifsfvnq
swargqgsgwldelqthgwdsesgtiiflhqwskgqfsneelsdlellfrfylfgltrei
qdhasskypfevqvkagcelhsggspegffqvafngldllsfqqttwvpspgcgslaqsv
chllnhqyegvtetvynlirstcprfllglldagkmyvhrqvkpeawlssgpspgpgrlq
lvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnaqgtwylratldvadgeaaglscrv
khsslegqdiilywhh