PDB entry 3ov6
View 3ov6 on RCSB PDB site
Description: CD1c in complex with MPM (mannosyl-beta1-phosphomycoketide)
Class: immune system
Keywords: MHC, Immunoglobulin Domain, Immune System, Antigen Presentation
Deposited on
2010-09-15, released
2011-01-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Beta-2-microglobulin, T-cell surface glycoprotein CD1c, T-cell surface glycoprotein CD1b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (3-101)
- expression tag (2)
- linker (102-105)
- Uniprot P29017 (Start-299)
- engineered mutation (168)
- engineered mutation (173)
- engineered mutation (224)
- engineered mutation (244)
- Uniprot P29016 (300-394)
- engineered mutation (357-358)
- expression tag (395-396)
Domains in SCOPe 2.08: d3ov6a1, d3ov6a2, d3ov6a3, d3ov6a4, d3ov6a5 - Heterogens: NAG, D12, MK0, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3ov6A (A:)
adpiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfs
kdwsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmggggsggsgsgggssada
sqehvsfhviqifsfvnqswargqgsgwldelqthgwdsesgtiiflhqwskgqfsneel
sdlellfrfylfgltreiqdhasqdyskypfevqvkagcelhsggspegffqvafngldl
lsfqqttwvpspgcgslaqsvchllnhqyegvtetvynlirstcprfllglldagkmyvh
rqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnaqgt
wylratldvadgeaaglscrvkhsslegqdiilywhh
Sequence, based on observed residues (ATOM records): (download)
>3ov6A (A:)
piqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmggggehvsfhviqifsfvnq
swargqgsgwldelqthgwdsesgtiiflhqwskgqfsneelsdlellfrfylfgltrei
qdhasskypfevqvkagcelhsggspegffqvafngldllsfqqttwvpspgcgslaqsv
chllnhqyegvtetvynlirstcprfllglldagkmyvhrqvkpeawlssgpspgpgrlq
lvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnaqgtwylratldvadgeaaglscrv
khsslegqdiilywhh