PDB entry 3ong

View 3ong on RCSB PDB site
Description: Crystal structure of UBA2ufd-Ubc9: insights into E1-E2 interactions in Sumo pathways
Class: ligase
Keywords: Ligase
Deposited on 2010-08-28, released 2011-01-12
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-09-18, with a file datestamp of 2013-09-13.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.224
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin-activating enzyme E1-like
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: UBA2, PIP2, UAL1, YDR390C, D9509.10
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: SUMO-conjugating enzyme UBC9
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: UBC9, YDL064W
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50623 (2-158)
      • expression tag (1)
    Domains in SCOPe 2.04: d3ongb_
  • Chain 'C':
    Compound: Ubiquitin-activating enzyme E1-like
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: UBA2, PIP2, UAL1, YDR390C, D9509.10
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: SUMO-conjugating enzyme UBC9
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: UBC9, YDL064W
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50623 (2-End)
      • expression tag (1)
    Domains in SCOPe 2.04: d3ongd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ongB (B:)
gsmsslclqrlqeerkkwrkdhpfgfyakpvkkadgsmdlqkweagipgkegtnwaggvy
pitveypneypskppkvkfpagfyhpnvypsgticlsilnedqdwrpaitlkqivlgvqd
lldspnpnspaqepawrsfsrnkaeydkkvllqakqysk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ongB (B:)
smsslclqrlqeerkkwrkdhpfgfyakpvkkadgsmdlqkweagipgkegtnwaggvyp
itveypneypskppkvkfpagfyhpnvypsgticlsilnedqdwrpaitlkqivlgvqdl
ldspnpnspaqepawrsfsrnkaeydkkvllqakqysk

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ongD (D:)
gsmsslclqrlqeerkkwrkdhpfgfyakpvkkadgsmdlqkweagipgkegtnwaggvy
pitveypneypskppkvkfpagfyhpnvypsgticlsilnedqdwrpaitlkqivlgvqd
lldspnpnspaqepawrsfsrnkaeydkkvllqakqysk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ongD (D:)
smsslclqrlqeerkkwrkdhpfgfyakpvkkadgsmdlqkweagipgkegtnwaggvyp
itveypneypskppkvkfpagfyhpnvypsgticlsilnedqdwrpaitlkqivlgvqdl
ldspnpnspaqepawrsfsrnkaeydkkvllqakqys