PDB entry 3olm

View 3olm on RCSB PDB site
Description: Structure and Function of a Ubiquitin Binding Site within the Catalytic Domain of a HECT Ubiquitin Ligase
Class: ligase
Keywords: ubiquitin E3 ligase, LIGASE
Deposited on 2010-08-26, released 2011-03-23
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-04-13, with a file datestamp of 2011-04-08.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.223
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase RSP5
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: RSP5, MDP1, NPI1, YER125W, SYGP-ORF41
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Ubiquitin
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: UBI4, SCD2, YLL039C
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3olmd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3olmD (D:)
    snamqifvktltgktitlevessdtidnvkskiqdkegippdqqrlifagkqledgrtls
    dyniqkestlhlvlrlrgg
    

    Sequence, based on observed residues (ATOM records): (download)
    >3olmD (D:)
    mqifvktltgktitlevessdtidnvkskiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlr