PDB entry 3ojc

View 3ojc on RCSB PDB site
Description: Crystal structure of a putative Asp/Glu Racemase from Yersinia pestis
Class: isomerase
Keywords: Structural Genomics, CSGID, Center for Structural Genomics of Infectious Diseases, alpha beta, 3-layer(aba) sandwich, Rossmann fold, Asp/Glu/Hydantoin racemase family, ISOMERASE
Deposited on 2010-08-21, released 2010-09-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative aspartate/glutamate racemase
    Species: Yersinia pestis [TaxId:214092]
    Gene: racX, YPO2758, YP_2405
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ojca1, d3ojca2
  • Chain 'B':
    Compound: Putative aspartate/glutamate racemase
    Species: Yersinia pestis [TaxId:214092]
    Gene: racX, YPO2758, YP_2405
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ojcb1, d3ojcb2
  • Chain 'C':
    Compound: Putative aspartate/glutamate racemase
    Species: Yersinia pestis [TaxId:214092]
    Gene: racX, YPO2758, YP_2405
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ojcc1, d3ojcc2
  • Chain 'D':
    Compound: Putative aspartate/glutamate racemase
    Species: Yersinia pestis [TaxId:214092]
    Gene: racX, YPO2758, YP_2405
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ojcd1, d3ojcd2
  • Heterogens: CA, HEZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ojcA (A:)
mmkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqt
aaqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidk
igllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayr
rvikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

    Sequence, based on observed residues (ATOM records): (download) 
    >3ojcA (A:)
mkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqta
aqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidki
gllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayrr
vikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ojcB (B:)
mmkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqt
aaqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidk
igllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayr
rvikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

    Sequence, based on observed residues (ATOM records): (download) 
    >3ojcB (B:)
mkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqta
aqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidki
gllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayrr
vikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ojcC (C:)
mmkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqt
aaqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidk
igllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayr
rvikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

    Sequence, based on observed residues (ATOM records): (download) 
    >3ojcC (C:)
mkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqta
aqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidki
gllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayrr
vikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ojcD (D:)
mmkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqt
aaqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidk
igllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayr
rvikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq

    Sequence, based on observed residues (ATOM records): (download) 
    >3ojcD (D:)
mkilgliggmswestipyyrminqhvkaqlgglhsakiilysvdfheieqlqakgdwqta
aqllsnaaislkhagaevivvctntmhkvaddieaacglpllhiadatavqikqqgidki
gllgtrytmeqgfyrgrltekhgievitpddtdreavnriiyeelclgiisetsrdayrr
vikkleaqgvqgiifgcteitllvnaqdasvpvfdttaihasaaadyalq