PDB entry 3oii

View 3oii on RCSB PDB site
Description: Crystal structure of Saccharomyces Cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine
Class: ribosomal protein
Keywords: EMG1, scNEP1, SPOUT, ribosome biogenesis, methyltransferase, rRNA processing, RIBOSOMAL PROTEIN
Deposited on 2010-08-19, released 2010-12-01
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-04-13, with a file datestamp of 2011-04-08.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.174
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: essential for mitotic growth 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: EMG1, NEP1, YLR186W, L9470.5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3oiia_
  • Chain 'B':
    Compound: essential for mitotic growth 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: EMG1, NEP1, YLR186W, L9470.5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3oiib_
  • Heterogens: SAH, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3oiiA (A:)
gmvedsrvrdalkggdqkalpaslvpqappvltskdkitkrmivvlamaslethkissng
pggdkyvllncddhqgllkkmgrdisearpdithqclltlldspinkagklqvyiqtsrg
ilievnptvriprtfkrfsglmvqllhklsirsvnseekllkviknpitdhlptkcrkvt
lsfdapvirvqdyiekldddesicvfvgamargkdnfadeyvdekvglsnyplsasvacs
kfchgaedawnil

    Sequence, based on observed residues (ATOM records): (download) 
    >3oiiA (A:)
ppvltskdkitkrmivvlamaslethkiyvllncddhqgllkkmgrdisearpdithqcl
ltlldspinkagklqvyiqtsrgilievnptvriprtfkrfsglmvqllhklsirsvnse
ekllkviknpitdhlptkcrkvtlsfdapvirvqdyiekldddesicvfvgamargkdnf
adeyvdekvglsnyplsasvacskfchgaedawnil

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3oiiB (B:)
gmvedsrvrdalkggdqkalpaslvpqappvltskdkitkrmivvlamaslethkissng
pggdkyvllncddhqgllkkmgrdisearpdithqclltlldspinkagklqvyiqtsrg
ilievnptvriprtfkrfsglmvqllhklsirsvnseekllkviknpitdhlptkcrkvt
lsfdapvirvqdyiekldddesicvfvgamargkdnfadeyvdekvglsnyplsasvacs
kfchgaedawnil

    Sequence, based on observed residues (ATOM records): (download) 
    >3oiiB (B:)
ppvltskdkitkrmivvlamaslethvllncddhqgllkkmgrdisearpdithqclltl
ldspinkagklqvyiqtsrgilievnptvriprtfkrfsglmvqllhklsirskllkvik
npitdhlptkcrkvtlsfdapvirvqdyiekldddesicvfvgamargkdnfadeyvdek
vglsnyplsasvacskfchgaedawnil