PDB entry 3of6

View 3of6 on RCSB PDB site
Description: Human pre-T cell receptor crystal structure
Class: immune system
Keywords: Ig fold, Immune System
Deposited on 2010-08-13, released 2010-10-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T cell receptor beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3OF6
    Domains in SCOPe 2.08: d3of6a1, d3of6a2
  • Chain 'B':
    Compound: T cell receptor beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3OF6
    Domains in SCOPe 2.08: d3of6b1, d3of6b2
  • Chain 'C':
    Compound: T cell receptor beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3OF6
    Domains in SCOPe 2.08: d3of6c1, d3of6c2
  • Chain 'D':
    Compound: Pre T-cell antigen receptor alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Pre T-cell antigen receptor alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Pre T-cell antigen receptor alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3of6A (A:)
agshmgvsqsprykvakrgqdvalrcdpisghvslfwyqqalgqgpefltyfqneaqldk
sglpsdrffaerpegsvstlkiqrtqqedsavylcasslgqayeqyfgpgtrltvtedlk
nvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplk
eqpalndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsae
awgradctsgddddk

    Sequence, based on observed residues (ATOM records): (download) 
    >3of6A (A:)
mgvsqsprykvakrgqdvalrcdpisghvslfwyqqalgqgpefltyfqneaqldksglp
sdrffaerpegsvstlkiqrtqqedsavylcasslgqayeqyfgpgtrltvtedlknvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplkeqpa
lndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3of6B (B:)
agshmgvsqsprykvakrgqdvalrcdpisghvslfwyqqalgqgpefltyfqneaqldk
sglpsdrffaerpegsvstlkiqrtqqedsavylcasslgqayeqyfgpgtrltvtedlk
nvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplk
eqpalndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsae
awgradctsgddddk

    Sequence, based on observed residues (ATOM records): (download) 
    >3of6B (B:)
mgvsqsprykvakrgqdvalrcdpisghvslfwyqqalgqgpefltyfqneaqldksglp
sdrffaerpegsvstlkiqrtqqedsavylcasslgqayeqyfgpgtrltvtedlknvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplkeqpa
lndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
ad

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3of6C (C:)
agshmgvsqsprykvakrgqdvalrcdpisghvslfwyqqalgqgpefltyfqneaqldk
sglpsdrffaerpegsvstlkiqrtqqedsavylcasslgqayeqyfgpgtrltvtedlk
nvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplk
eqpalndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsae
awgradctsgddddk

    Sequence, based on observed residues (ATOM records): (download) 
    >3of6C (C:)
hmgvsqsprykvakrgqdvalrcdpisghvslfwyqqalgqgpefltyfqneaqldksgl
psdrffaerpegsvstlkiqrtqqedsavylcasslgqayeqyfgpgtrltvtedlknvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvstdpqplkeqp
alndsryclssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
rad

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.