PDB entry 3oel

View 3oel on RCSB PDB site
Description: Crystal structure of GluN2D ligand-binding core in complex with D-glutamate
Class: transport protein
Keywords: Ion channel, D-glutamate, disulfide bonds, TRANSPORT PROTEIN
Deposited on 2010-08-12, released 2011-05-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-08-23, with a file datestamp of 2017-08-18.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate [NMDA] receptor subunit epsilon-4
    Species: Rattus norvegicus [TaxId:10116]
    Gene: GluN2D, Grin2d
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q62645 (Start-141)
      • linker (142-143)
    • Uniprot Q62645 (144-End)
    Domains in SCOPe 2.08: d3oela_
  • Heterogens: DGL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3oelA (A:)
    gddtqhltvatleerpfvivepadpisgtcirdsvpcrsqlnrthspppdaprpekrcck
    gfcidilkrlahtigfsydlylvtngkhgkkidgvwngmigevfyqradmaigsltinee
    rseivdfsvpfvetgisvmvargttvsglsdrkfqrpqeqypplkfgtvpngsteknirs
    nypdmhsymvrynqprveealtqlkagkldafiydaavlnymarkdegcklvtigsgkvf
    attgygialhkgsrwkrpidlallqflgddeiemlerlwlsgichn
    

    Sequence, based on observed residues (ATOM records): (download)
    >3oelA (A:)
    qhltvatleerpfvivepadpisgtcirdsvpcrsqrcckgfcidilkrlahtigfsydl
    ylvtngkhgkkidgvwngmigevfyqradmaigsltineerseivdfsvpfvetgisvmv
    argttvsglsdrkfqrpqeqypplkfgtvpngsteknirsnypdmhsymvrynqprveea
    ltqlkagkldafiydaavlnymarkdegcklvtigsgkvfattgygialhkgsrwkrpid
    lallqflgddeiemlerlwlsgic