PDB entry 3oab

View 3oab on RCSB PDB site
Description: Mint deletion mutant of heterotetrameric geranyl pyrophosphate synthase in complex with ligands
Class: transferase
Keywords: prenyltransferase, All alpha-helices fold, monoterpene biosynthesis, chroloplast, TRANSFERASE
Deposited on 2010-08-05, released 2010-11-03
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-02-26, with a file datestamp of 2014-02-21.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.208
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Geranyl diphosphate synthase large subunit
    Species: Mentha x piperita [TaxId:34256]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9SBR3 (1-294)
      • expression tag (0)
    Domains in SCOPe 2.06: d3oaba1, d3oaba2
  • Chain 'B':
    Compound: Geranyl diphosphate synthase small subunit
    Species: Mentha x piperita [TaxId:34256]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9SBR4 (1-End)
      • expression tag (0)
  • Chain 'C':
    Compound: Geranyl diphosphate synthase small subunit
    Species: Mentha x piperita [TaxId:34256]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9SBR4 (1-End)
      • expression tag (0)
  • Chain 'D':
    Compound: Geranyl diphosphate synthase large subunit
    Species: Mentha x piperita [TaxId:34256]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9SBR3 (1-294)
      • expression tag (0)
    Domains in SCOPe 2.06: d3oabd1, d3oabd2
  • Heterogens: PPV, DST, MG, EDO, IPE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3oabA (A:)
mfdfdgymlrkaksvnkaleaavqmkeplkihesmrysllaggkrvrpmlciaacelvgg
destampaacavemihtmslmhddlpcmdnddlrrgkptnhmafgesvavlagdallsfa
fehvaaatkgapperivrvlgelavsigseglvagqvvdvcsegmaevgldhlefihhhk
taallqgsvvlgailgggkeeevaklrkfancigllfqvvddildvtksskelgktagkd
lvadkttypkligvekskefadrlnreaqeqllhfhphraaplialanyiayrdn

    Sequence, based on observed residues (ATOM records): (download) 
    >3oabA (A:)
mfdfdgymlrkaksvnkaleaavqmkeplkihesmrysllaggkrvrpmlciaacelvgg
destampaacavemihtmslmhddlpcmdnddlrrgkptnhmafgesvavlagdallsfa
fehvaaatkgapperivrvlgelavsigseglvagqvvdvcsegmaevgldhlefihhhk
taallqgsvvlgailgggkeeevaklrkfancigllfqvvddildvtkkttypkligvek
skefadrlnreaqeqllhfhphraaplialanyiayrdn

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3oabD (D:)
mfdfdgymlrkaksvnkaleaavqmkeplkihesmrysllaggkrvrpmlciaacelvgg
destampaacavemihtmslmhddlpcmdnddlrrgkptnhmafgesvavlagdallsfa
fehvaaatkgapperivrvlgelavsigseglvagqvvdvcsegmaevgldhlefihhhk
taallqgsvvlgailgggkeeevaklrkfancigllfqvvddildvtksskelgktagkd
lvadkttypkligvekskefadrlnreaqeqllhfhphraaplialanyiayrdn