PDB entry 3o4g

View 3o4g on RCSB PDB site
Description: Structure and Catalysis of Acylaminoacyl Peptidase
Class: hydrolase
Keywords: alpha/beta hydrolase fold, beta propeller, hydrolase, oligopeptidase, size selectivity
Deposited on 2010-07-27, released 2010-11-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-02-09, with a file datestamp of 2011-02-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.218
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Acylamino-acid-releasing enzyme
    Species: Aeropyrum pernix [TaxId:56636]
    Gene: APE_1547.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3o4ga1, d3o4ga2
  • Chain 'B':
    Compound: Acylamino-acid-releasing enzyme
    Species: Aeropyrum pernix [TaxId:56636]
    Gene: APE_1547.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3o4gb1, d3o4gb2
  • Chain 'C':
    Compound: Acylamino-acid-releasing enzyme
    Species: Aeropyrum pernix [TaxId:56636]
    Gene: APE_1547.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3o4gc1, d3o4gc2
  • Chain 'D':
    Compound: Acylamino-acid-releasing enzyme
    Species: Aeropyrum pernix [TaxId:56636]
    Gene: APE_1547.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3o4gd1, d3o4gd2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3o4gA (A:)
mriimpvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvkln
repinsvldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdt
geavvftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslfts
nlssgglrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdf
ssyrptaitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtsht
slstpprivslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpg
ptvvlvhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggel
edvsaaarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyel
sdaafrnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgell
argktfeahiipdaghaintmedavkillpavfflatqrerr

    Sequence, based on observed residues (ATOM records): (download) 
    >3o4gA (A:)
mpvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvklnrepi
nsvldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdtgeav
vftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslftsnlss
gglrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdfssyr
ptaitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtshtslst
pprivslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpgptvv
lvhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggeledvs
aaarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyelsdaa
frnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgellargk
tfeahiipdaghaintmedavkillpavfflatqrer

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3o4gB (B:)
mriimpvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvkln
repinsvldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdt
geavvftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslfts
nlssgglrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdf
ssyrptaitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtsht
slstpprivslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpg
ptvvlvhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggel
edvsaaarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyel
sdaafrnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgell
argktfeahiipdaghaintmedavkillpavfflatqrerr

    Sequence, based on observed residues (ATOM records): (download) 
    >3o4gB (B:)
vefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvklnrepins
vldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdtgeavvf
tgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslftsnlssgg
lrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdfssyrpt
aitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtshtslstpp
rivslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpgptvvlv
hggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggeledvsaa
arwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyelsdaafr
nfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgellargktf
eahiipdahaintmedavkillpavfflatqrer

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3o4gC (C:)
mriimpvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvkln
repinsvldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdt
geavvftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslfts
nlssgglrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdf
ssyrptaitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtsht
slstpprivslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpg
ptvvlvhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggel
edvsaaarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyel
sdaafrnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgell
argktfeahiipdaghaintmedavkillpavfflatqrerr

    Sequence, based on observed residues (ATOM records): (download) 
    >3o4gC (C:)
pvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvklnrepin
svldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdtgeavv
ftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslftsnlssg
glrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdfssyrp
taitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtshtslstp
privslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpgptvvl
vhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggeledvsa
aarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyelsdaaf
rnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgellargkt
feahiipdaghaintmedavkillpavfflatqrer

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3o4gD (D:)
mriimpvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvkln
repinsvldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdt
geavvftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslfts
nlssgglrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdf
ssyrptaitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtsht
slstpprivslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpg
ptvvlvhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggel
edvsaaarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyel
sdaafrnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgell
argktfeahiipdaghaintmedavkillpavfflatqrerr

    Sequence, based on observed residues (ATOM records): (download) 
    >3o4gD (D:)
pvefsrivrdverliavekyslqgvvdgdkllvvgfsegsvnaylydggetvklnrepin
svldphygvgrvilvrdvskgaeqhalfkvntsrpgeeqrleavkpmrilsgvdtgeavv
ftgatedrvalyaldggglrelarlpgfgfvsdirgdliaglgffgggrvslftsnlssg
glrvfdsgegsfssasispgmkvtagletarearlvtvdprdgsvedlelpskdfssyrp
taitwlgylpdgrlavvarregrsavfidgerveapqgnhgrvvlwrgklvtshtslstp
privslpsgepllegglpedlrrsiagsrlvwvesfdgsrvptyvlesgraptpgptvvl
vhggpfaedsdswdtfaaslaaagfhvvmpnyrgstgygeewrlkiigdpcggeledvsa
aarwaresglaselyimgysyggymtlcaltmkpglfkagvagasvvdweemyelsdaaf
rnfieqltggsreimrsrspinhvdrikeplalihpqndsrtplkpllrlmgellargkt
feahiipdaghaintmedavkillpavfflatqrer