PDB entry 3o3h

View 3o3h on RCSB PDB site
Description: T. maritima RNase H2 D107N in complex with nucleic acid substrate and manganese ions
Class: HYDROLASE/DNA-RNA hybrid
Keywords: RNase H fold, nuclease, HYDROLASE-DNA-RNA hybrid complex
Deposited on 2010-07-24, released 2010-12-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-12-08, with a file datestamp of 2010-12-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.189
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribonuclease hii
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rnhB, TM_0915
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X017 (0-221)
      • engineered mutation (105)
    Domains in SCOPe 2.08: d3o3ha_
  • Chain 'C':
    Compound: DNA (5'-d(*gp*ap*ap*tp*cp*ap*gp*gp*tp*gp*tp*c)-3')
  • Chain 'D':
    Compound: DNA/RNA (5'-d(*gp*ap*cp*ap*c)-r(p*c)-d(p*tp*gp*ap*tp*tp*c)-3')
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3o3hA (A:)
gidelykkefgivagvdeagrgclagpvvaaavvlekeiegindskqlspakrerlldei
mekaavgigiaspeeidlynifnatklamnralenlsvkpsfvlvngkgielsvpgtclv
kgdqkskligaasivakvfrdrlmsefhrmypqfsfhkhkgyatkehlneirkngvlpih
rlsfepvlelltddllreffekglisenrferilnllgarks

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.