PDB entry 3nvy

View 3nvy on RCSB PDB site
Description: Crystal Structure of Bovine Xanthine Oxidase in Complex with Quercetin
Class: oxidoreductase
Keywords: Hydroxylase, Homodimer, Xanthine Oxidase, Quercetin, OXIDOREDUCTASE
Deposited on 2010-07-08, released 2011-01-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-09-03, with a file datestamp of 2014-08-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.194
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Xanthine dehydrogenase/oxidase
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3nvya1, d3nvya2
  • Chain 'B':
    Compound: Xanthine dehydrogenase/oxidase
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3nvyb1, d3nvyb2
  • Chain 'C':
    Compound: Xanthine dehydrogenase/oxidase
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3nvyc1, d3nvyc2
  • Chain 'J':
    Compound: Xanthine dehydrogenase/oxidase
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3nvyj1, d3nvyj2
  • Chain 'K':
    Compound: Xanthine dehydrogenase/oxidase
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3nvyk1, d3nvyk2
  • Chain 'L':
    Compound: Xanthine dehydrogenase/oxidase
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3nvyl1, d3nvyl2
  • Heterogens: FES, FAD, MTE, MOS, QUE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3nvyA (A:)
tadelvffvngkkvveknadpettllaylrrklglrgtklgcgeggcgactvmlskydrl
qdkiihfsanaclapictlhhvavttvegigstktrlhpvqeriakshgsqcgfctpgiv
msmytllrnqpeptveeiedafqgnlcrctgyrpilqgfrtfak

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3nvyB (B:)
lfnpeefmpldptqepifppellrlkdvppkqlrfegervtwiqastlkelldlkaqhpe
aklvvgnteigiemkfknqlfpmiicpawipelnavehgpegisfgaacalssvektlle
avaklptqktevfrgvleqlrwfagkqvksvaslggniitaspisdlnpvfmasgtklti
vsrgtrrtvpmdhtffpsyrktllgpeeillsieipysredeffsafkqasrreddiakv
tcgmrvlfqpgsmqvkelalcyggmadrtisalkttqkqlskfwnekllqdvcaglaeel
slspdapggmiefrrtltlsfffkfyltvlkklg

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3nvyC (C:)
dtvgrplphlaaamqasgeavycddipryenelflrlvtstrahakiksidvseaqkvpg
fvcflsaddipgsnetglfndetvfakdtvtcvghiigavvadtpehaeraahvvkvtye
dlpaiitiedaiknnsfygselkiekgdlkkgfseadnvvsgelyiggqdhfylethcti
aipkgeegemelfvstqnamktqsfvakmlgvpvnrilvrvkrmgggfggketrstlvsv
avalaayktghpvrcmldrnedmlitggrhpflarykvgfmktgtivalevdhysnagns
rdlshsimeralfhmdncykipnirgtgrlcktnlssntafrgfggpqalfiaenwmsev
avtcglpaeevrwknmykegdlthfnqrlegfsvprcwdeclkssqyyarksevdkfnke
ncwkkrglciiptkfgisftvpflnqagalihvytdgsvlvshggtemgqglhtkmvqva
skalkipiskiyisetstntvpnssptaasvstdiygqavyeacqtilkrlepfkkknpd
gswedwvmaayqdrvslsttgfyrtpnlgysfetnsgnafhyftygvacseveidcltgd
hknlrtdivmdvgsslnpaidigqvegafvqglglftleelhyspegslhtrgpstykip
afgsiptefrvsllrdcpnkkaiyaskavgepplflgasvffaikdairaaraqhtnnnt
kelfrldspatpekirnacvdkfttlcvtgapgnck

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3nvyJ (J:)
tadelvffvngkkvveknadpettllaylrrklglrgtklgcgeggcgactvmlskydrl
qdkiihfsanaclapictlhhvavttvegigstktrlhpvqeriakshgsqcgfctpgiv
msmytllrnqpeptveeiedafqgnlcrctgyrpilqgfrtfak

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >3nvyK (K:)
lfnpeefmpldptqepifppellrlkdvppkqlrfegervtwiqastlkelldlkaqhpe
aklvvgnteigiemkfknqlfpmiicpawipelnavehgpegisfgaacalssvektlle
avaklptqktevfrgvleqlrwfagkqvksvaslggniitaspisdlnpvfmasgtklti
vsrgtrrtvpmdhtffpsyrktllgpeeillsieipysredeffsafkqasrreddiakv
tcgmrvlfqpgsmqvkelalcyggmadrtisalkttqkqlskfwnekllqdvcaglaeel
slspdapggmiefrrtltlsfffkfyltvlkklg

    Sequence, based on observed residues (ATOM records): (download) 
    >3nvyK (K:)
pkqlrfegervtwiqastlkelldlkaqhpeaklvvgnteigiemkfknqlfpmiicpaw
ipelnavehgpegisfgaacalssvektlleavaklptqktevfrgvleqlrwfagkqvk
svaslggniitaspisdlnpvfmasgtkltivsrgtrrtvpmdhtffpsyrktllgpeei
llsieipysredeffsafkqasrreddiakvtcgmrvlfqpgsmqvkelalcyggmadrt
isalkttqkqlskfwnekllqdvcaglaeelslspdapggmiefrrtltlsfffkfyltv
lkklg

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3nvyL (L:)
dtvgrplphlaaamqasgeavycddipryenelflrlvtstrahakiksidvseaqkvpg
fvcflsaddipgsnetglfndetvfakdtvtcvghiigavvadtpehaeraahvvkvtye
dlpaiitiedaiknnsfygselkiekgdlkkgfseadnvvsgelyiggqdhfylethcti
aipkgeegemelfvstqnamktqsfvakmlgvpvnrilvrvkrmgggfggketrstlvsv
avalaayktghpvrcmldrnedmlitggrhpflarykvgfmktgtivalevdhysnagns
rdlshsimeralfhmdncykipnirgtgrlcktnlssntafrgfggpqalfiaenwmsev
avtcglpaeevrwknmykegdlthfnqrlegfsvprcwdeclkssqyyarksevdkfnke
ncwkkrglciiptkfgisftvpflnqagalihvytdgsvlvshggtemgqglhtkmvqva
skalkipiskiyisetstntvpnssptaasvstdiygqavyeacqtilkrlepfkkknpd
gswedwvmaayqdrvslsttgfyrtpnlgysfetnsgnafhyftygvacseveidcltgd
hknlrtdivmdvgsslnpaidigqvegafvqglglftleelhyspegslhtrgpstykip
afgsiptefrvsllrdcpnkkaiyaskavgepplflgasvffaikdairaaraqhtnnnt
kelfrldspatpekirnacvdkfttlcvtgapgnck

    Sequence, based on observed residues (ATOM records): (download) 
    >3nvyL (L:)
dtvgrplphlaaamqasgeavycddipryenelflrlvtstrahakiksidvseaqkvpg
fvcflsaddipgsnetglfndetvfakdtvtcvghiigavvadtpehaeraahvvkvtye
dlpaiitiedaiknnsfygselkiekgdlkkgfseadnvvsgelyiggqdhfylethcti
aipkgeegemelfvstqnamktqsfvakmlgvpvnrilvrvkrmgggfggketrstlvsv
avalaayktghpvrcmldrnedmlitggrhpflarykvgfmktgtivalevdhysnagns
rdlshsimeralfhmdncykipnirgtgrlcktnlssntafrgfggpqalfiaenwmsev
avtcglpaeevrwknmykegdlthfnqrlegfsvprcwdeclkssqyyarksevdkfnke
ncwkkrglciiptkfgisftvpflnqagalihvytdgsvlvshggtemgqglhtkmvqva
skalkipiskiyisetstntvpnssptaasvstdiygqavyeacqtilkrlepfkkknpd
gswedwvmaayqdrvslsttgfyrtpnlgysfetnsgnafhyftygvacseveidcltgd
hknlrtdivmdvgsslnpaidigqvegafvqglglftleelhyspegslhtrgpstykip
afgsiptefrvsllrdcpnkkaiyaskavgepplflgasvffaikdairaaraqhtnnnt
kelfrldspatpekirnacvdkftt