PDB entry 3nkv
View 3nkv on RCSB PDB site
Description: Crystal structure of Rab1b covalently modified with AMP at Y77
Class: protein transport
Keywords: posttranslational modification, AMPylation, adenylylation, Rab1b, vesicular transport, PROTEIN TRANSPORT
Deposited on
2010-06-21, released
2010-08-04
The last revision prior to the SCOPe 2.01 freeze date was dated
2010-09-22, with a file datestamp of
2010-09-17.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.151
AEROSPACI score: 0.58
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ras-related protein Rab-1B
Species: Homo sapiens [TaxId:9606]
Gene: RAB1B, RAB1B_HUMAN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3nkva_ - Chain 'B':
Compound: Ras-related protein Rab-1B
Species: Homo sapiens [TaxId:9606]
Gene: RAB1B, RAB1B_HUMAN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3nkvb_ - Heterogens: GNP, MG, BA, AMP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3nkvA (A:)
ghmpeydylfkllligdsgvgksclllrfaddtytesyistigvdfkirtieldgktikl
qiwdtagqerfrtitssyyrgahgiivvydvtdqesyanvkqwlqeidryasenvnkllv
gnksdlttkkvvdnttakefadslgipfletsaknatnveqafmtmaaeikkrmg
Sequence, based on observed residues (ATOM records): (download)
>3nkvA (A:)
eydylfkllligdsgvgksclllrfaddtytesyistigvdfkirtieldgktiklqiwd
tagqerfrtitssyyrgahgiivvydvtdqesyanvkqwlqeidryasenvnkllvgnks
dlttkkvvdnttakefadslgipfletsaknatnveqafmtmaaeikkrm
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3nkvB (B:)
ghmpeydylfkllligdsgvgksclllrfaddtytesyistigvdfkirtieldgktikl
qiwdtagqerfrtitssyyrgahgiivvydvtdqesyanvkqwlqeidryasenvnkllv
gnksdlttkkvvdnttakefadslgipfletsaknatnveqafmtmaaeikkrmg
Sequence, based on observed residues (ATOM records): (download)
>3nkvB (B:)
eydylfkllligdsgvgksclllrfaddtytesyistigvdfkirtieldgktiklqiwd
tagqerfrtitssyyrgahgiivvydvtdqesyanvkqwlqeidryasnvnkllvgnksd
lttkkvvdnttakefadslgipfletsaknatnveqafmtmaaeikkrm