PDB entry 3nkb

View 3nkb on RCSB PDB site
Description: A 1.9A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage
Deposited on 2010-06-18, released 2010-09-01
The last revision was dated 2010-09-01, with a file datestamp of 2010-08-27.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: 0.217
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA/RNA (5'-d(*(dur))-d(*gp*g)-r(p*cp*up*up*gp*cp*a)-3')
    Species: synthetic, synthetic
  • Chain 'B':
    Compound: The hepatitis delta virus ribozyme
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.07, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.