PDB entry 3njr

View 3njr on RCSB PDB site
Description: Crystal structure of C-terminal domain of precorrin-6Y C5,15-methyltransferase from Rhodobacter capsulatus
Class: transferase
Keywords: methyltransferase, decarboxylase, TRANSFERASE
Deposited on 2010-06-17, released 2011-06-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-10-31, with a file datestamp of 2012-10-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.189
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Precorrin-6y methylase
    Species: Rhodobacter capsulatus [TaxId:272942]
    Gene: cobL
    Database cross-references and differences (RAF-indexed):
    • Uniprot O68099 (21-203)
      • expression tag (20)
    Domains in SCOPe 2.08: d3njra1, d3njra2
  • Chain 'B':
    Compound: Precorrin-6y methylase
    Species: Rhodobacter capsulatus [TaxId:272942]
    Gene: cobL
    Database cross-references and differences (RAF-indexed):
    • Uniprot O68099 (21-203)
      • expression tag (20)
    Domains in SCOPe 2.08: d3njrb1, d3njrb2
  • Heterogens: SAH, GOL, PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3njrA (A:)
    mgsshhhhhhssglvprgshmsqvpgrpesafahdgqitkspmraltlaalaprrgellw
    digggsgsvsvewclaggraitiepradrieniqknidtyglsprmravqgtapaaladl
    plpeavfiggggsqalydrlwewlapgtrivanavtlesetlltqlharhggqllridia
    qaeplgrmrgwsasrpqlqwsgqr
    

    Sequence, based on observed residues (ATOM records): (download)
    >3njrA (A:)
    msqvpgrpesafahdgqitkspmraltlaalaprrgellwdigggsgsvsvewclaggra
    itiepradrieniqknidtyglsprmravqgtapaaladlplpeavfiggggsqalydrl
    wewlapgtrivanavtlesetlltqlharhggqllridiaqaeplgrmrgwsasrpqlqw
    sgqr
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3njrB (B:)
    mgsshhhhhhssglvprgshmsqvpgrpesafahdgqitkspmraltlaalaprrgellw
    digggsgsvsvewclaggraitiepradrieniqknidtyglsprmravqgtapaaladl
    plpeavfiggggsqalydrlwewlapgtrivanavtlesetlltqlharhggqllridia
    qaeplgrmrgwsasrpqlqwsgqr
    

    Sequence, based on observed residues (ATOM records): (download)
    >3njrB (B:)
    msqvpgrpesafahdgqitkspmraltlaalaprrgellwdigggsgsvsvewclaggra
    itiepradrieniqknidtyglsprmravqgtapaaladlplpeavfiggggsqalydrl
    wewlapgtrivanavtlesetlltqlharhggqllridiaqaeplgrmrgwsasrpqlqw
    sgqr