PDB entry 3niy

View 3niy on RCSB PDB site
Description: Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1
Class: hydrolase
Keywords: TIM-barrel, xylanase, HYDROLASE
Deposited on 2010-06-16, released 2011-05-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-05-04, with a file datestamp of 2011-05-06.
Experiment type: XRAY
Resolution: 1.58 Å
R-factor: 0.16
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: endo-1,4-beta-xylanase
    Species: Thermotoga petrophila RKU-1 [TaxId:390874]
    Gene: Tpet_0854
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5IL00 (17-340)
      • expression tag (15-16)
    Domains in SCOPe 2.06: d3niya1, d3niya2
  • Chain 'B':
    Compound: endo-1,4-beta-xylanase
    Species: Thermotoga petrophila RKU-1 [TaxId:390874]
    Gene: Tpet_0854
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5IL00 (17-340)
      • expression tag (16)
    Domains in SCOPe 2.06: d3niyb1, d3niyb2
  • Heterogens: SO4, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3niyA (A:)
mghhhhhhenlyfqghmqnvslrelaeklniyigfaainnfwslsdeekymevarrefni
ltpenqmkwdtihperdrynftpaekhvefaeennmivhghtlvwhnqlpgwitgrewtk
eellnvledhiktvvshfkgrvkiwdvvneavsdsgtyresvwyktigpeyiekafrwtk
eadpdailiyndysieeinaksnfvynmikelkekgvpvdgigfqmhidyrglnydsfrr
nlerfaklglqiyitemdvriplsgsedyylkkqaeicakifdicldnpavkaiqfwgft
dkyswvpgffkgygkallfdenynpkpcyyaikevlekkie

    Sequence, based on observed residues (ATOM records): (download) 
    >3niyA (A:)
hmqnvslrelaeklniyigfaainnfwslsdeekymevarrefniltpenqmkwdtihpe
rdrynftpaekhvefaeennmivhghtlvwhnqlpgwitgrewtkeellnvledhiktvv
shfkgrvkiwdvvneavsdsgtyresvwyktigpeyiekafrwtkeadpdailiyndysi
eeinaksnfvynmikelkekgvpvdgigfqmhidyrglnydsfrrnlerfaklglqiyit
emdvriplsgsedyylkkqaeicakifdicldnpavkaiqfwgftdkyswvpgffkgygk
allfdenynpkpcyyaikevlekkie

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3niyB (B:)
mghhhhhhenlyfqghmqnvslrelaeklniyigfaainnfwslsdeekymevarrefni
ltpenqmkwdtihperdrynftpaekhvefaeennmivhghtlvwhnqlpgwitgrewtk
eellnvledhiktvvshfkgrvkiwdvvneavsdsgtyresvwyktigpeyiekafrwtk
eadpdailiyndysieeinaksnfvynmikelkekgvpvdgigfqmhidyrglnydsfrr
nlerfaklglqiyitemdvriplsgsedyylkkqaeicakifdicldnpavkaiqfwgft
dkyswvpgffkgygkallfdenynpkpcyyaikevlekkie

    Sequence, based on observed residues (ATOM records): (download) 
    >3niyB (B:)
mqnvslrelaeklniyigfaainnfwslsdeekymevarrefniltpenqmkwdtihper
drynftpaekhvefaeennmivhghtlvwhnqlpgwitgrewtkeellnvledhiktvvs
hfkgrvkiwdvvneavsdsgtyresvwyktigpeyiekafrwtkeadpdailiyndysie
einaksnfvynmikelkekgvpvdgigfqmhidyrglnydsfrrnlerfaklglqiyite
mdvriplsgsedyylkkqaeicakifdicldnpavkaiqfwgftdkyswvpgffkgygka
llfdenynpkpcyyaikevlekkie