PDB entry 3nd7
View 3nd7 on RCSB PDB site
Description: Crystal structure of phosphopantetheine adenylyltransferase from Enterococcus faecalis in the ligand-unbound state and in complex with ATP and pantetheine
Class: transferase
Keywords: Phosphopantetheine adenylyltransferase, PPAT, Coenzyme A biosynthetic pathway, TRANSFERASE
Deposited on
2010-06-07, released
2011-06-22
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-12-14, with a file datestamp of
2011-12-09.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.217
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: phosphopantetheine adenylyltransferase
Species: Enterococcus faecalis [TaxId:1351]
Gene: coaD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3nd7a_ - Chain 'B':
Compound: phosphopantetheine adenylyltransferase
Species: Enterococcus faecalis [TaxId:1351]
Gene: coaD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3nd7b_ - Chain 'C':
Compound: phosphopantetheine adenylyltransferase
Species: Enterococcus faecalis [TaxId:1351]
Gene: coaD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3nd7c_ - Chain 'D':
Compound: phosphopantetheine adenylyltransferase
Species: Enterococcus faecalis [TaxId:1351]
Gene: coaD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3nd7d_ - Chain 'E':
Compound: phosphopantetheine adenylyltransferase
Species: Enterococcus faecalis [TaxId:1351]
Gene: coaD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3nd7e_ - Chain 'F':
Compound: phosphopantetheine adenylyltransferase
Species: Enterococcus faecalis [TaxId:1351]
Gene: coaD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3nd7f_ - Heterogens: PNY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3nd7A (A:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfintskqtlftpeekkylieeatk
empnvrvimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfll
aeepyahvsssllkevlrfggdvsdylppniyhalkqkkndwslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3nd7A (A:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfilftpeekkylieeatkempnvr
vimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfllaeepya
hvsssllkevlrfggdvsdylppniyhalkqk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3nd7B (B:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfintskqtlftpeekkylieeatk
empnvrvimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfll
aeepyahvsssllkevlrfggdvsdylppniyhalkqkkndwslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3nd7B (B:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfilftpeekkylieeatkempnvr
vimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfllaeepya
hvsssllkevlrfggdvsdylppniyhalkqk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3nd7C (C:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfintskqtlftpeekkylieeatk
empnvrvimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfll
aeepyahvsssllkevlrfggdvsdylppniyhalkqkkndwslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3nd7C (C:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfilftpeekkylieeatkempnvr
vimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfllaeepya
hvsssllkevlrfggdvsdylppniyhalkqk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3nd7D (D:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfintskqtlftpeekkylieeatk
empnvrvimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfll
aeepyahvsssllkevlrfggdvsdylppniyhalkqkkndwslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3nd7D (D:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfilftpeekkylieeatkempnvr
vimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfllaeepya
hvsssllkevlrfggdvsdylppniyhalkqk
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3nd7E (E:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfintskqtlftpeekkylieeatk
empnvrvimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfll
aeepyahvsssllkevlrfggdvsdylppniyhalkqkkndwslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3nd7E (E:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfilftpeekkylieeatkempnvr
vimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfllaeepya
hvsssllkevlrfggdvsdylppniyhalkqk
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3nd7F (F:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfintskqtlftpeekkylieeatk
empnvrvimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfll
aeepyahvsssllkevlrfggdvsdylppniyhalkqkkndwslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3nd7F (F:)
mrkialfpgsfdpmtnghlnliersaklfdeviigvfilftpeekkylieeatkempnvr
vimqetqltvesakslganflirgirnvkdyeyekdiakmnqhlapeietvfllaeepya
hvsssllkevlrfggdvsdylppniyhalkqk