PDB entry 3ncu
View 3ncu on RCSB PDB site
Description: Structural and functional insights into pattern recognition by the innate immune receptor RIG-I
Class: RNA binding protein/RNA
Keywords: innate immune receptor, RIG-I c-terminal domain, RNA BINDING PROTEIN-RNA complex
Deposited on
2010-06-05, released
2010-06-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2010-08-18, with a file datestamp of
2010-08-13.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.192
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: rig-I
Species: Homo sapiens [TaxId:9606]
Gene: DDX58, RIG-I
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3ncua_ - Chain 'B':
Compound: rig-I
Species: Homo sapiens [TaxId:9606]
Gene: DDX58, RIG-I
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3ncub_ - Chain 'C':
Compound: 5'-r(*(GDP)p*ap*cp*gp*cp*up*ap*gp*cp*gp*up*c)-3'
- Chain 'D':
Compound: 5'-r(*(GDP)p*ap*cp*gp*cp*up*ap*gp*cp*gp*up*c)-3'
- Heterogens: ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3ncuA (A:)
dsqekpkpvpdkenkkllcrkckalacytadvrvieechytvlgdafkecfvsrphpkpk
qfssfekrakifcarqncshdwgihvkyktfeipvikiesfvvediatgvqtlyskwkdf
hfekipfdpaemsk
Sequence, based on observed residues (ATOM records): (download)
>3ncuA (A:)
enkkllcrkckalacytadvrvieechytvlgdafkecfvsrphpkpkqfssfekrakif
carqncshdwgihvkyktfeipvikiesfvvediatgvqtlyskwkdfhfekipfdpaem
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3ncuB (B:)
dsqekpkpvpdkenkkllcrkckalacytadvrvieechytvlgdafkecfvsrphpkpk
qfssfekrakifcarqncshdwgihvkyktfeipvikiesfvvediatgvqtlyskwkdf
hfekipfdpaemsk
Sequence, based on observed residues (ATOM records): (download)
>3ncuB (B:)
enkkllcrkckalacytadvrvieechytvlgdafkecfvsrphpkpkqfssfekrakif
carqncshdwgihvkyktfeipvikiesfvvediatgvqtlyskwkdfhfekipfdpaem
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.