PDB entry 3nag
View 3nag on RCSB PDB site
Description: Crystal structure of the phosphoribosylpyrophosphate (PRPP) synthetase from Thermoplasma Volcanium in complex with ADP
Class: transferase
Keywords: phosphoribosyl transferase, ADP binding, TRANSFERASE
Deposited on
2010-06-02, released
2011-06-08
The last revision prior to the SCOPe 2.03 freeze date was dated
2012-04-25, with a file datestamp of
2012-04-20.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.178
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ribose-phosphate pyrophosphokinase
Species: Thermoplasma volcanium GSS1 [TaxId:273116]
Gene: prs, TV0197, TVG0201915, TVN0197
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3naga1, d3naga2 - Chain 'B':
Compound: Ribose-phosphate pyrophosphokinase
Species: Thermoplasma volcanium GSS1 [TaxId:273116]
Gene: prs, TV0197, TVG0201915, TVN0197
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3nagb1, d3nagb2 - Heterogens: SO4, ADP, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3nagA (A:)
mkiialrsslklaariaeelktepvmpderrfpdgelylrydedltghnifiignthsda
evmemiltlsaiqdyrtksvniiapyygyarqhqrykngepissqilteiyssysnsiat
vdihdektlsyskvkfsdlhandaivryyknvdvdyvvspddgglarvadisaklgkkhf
fiekkriddrtvemkvpnvdvngkkllivddiistggtiakssgllrekgaskiyvsavh
glfvngsenkilqnadeihvtdtveskfsdisvyqevcnyirdida
Sequence, based on observed residues (ATOM records): (download)
>3nagA (A:)
mkiialrsslklaariaeelktepvmpderrfpdgelylrydedltghnifiignthsda
evmemiltlsaiqdyrtksvniiapyygyarqhqrykngepissqilteiyssysnsiat
vdihdektlsyskvkfsdlhandaivryyknvdvdyvvspddgglarvadisaklgkkhf
fiekkriddrtvemkvpnvdvngkkllivddiistggtiakssgllrekgaskiyvsavh
glfvngsenkilqnadeihvtdtveskfsdisvyqevcnyirdi
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3nagB (B:)
mkiialrsslklaariaeelktepvmpderrfpdgelylrydedltghnifiignthsda
evmemiltlsaiqdyrtksvniiapyygyarqhqrykngepissqilteiyssysnsiat
vdihdektlsyskvkfsdlhandaivryyknvdvdyvvspddgglarvadisaklgkkhf
fiekkriddrtvemkvpnvdvngkkllivddiistggtiakssgllrekgaskiyvsavh
glfvngsenkilqnadeihvtdtveskfsdisvyqevcnyirdida