PDB entry 3n2x
View 3n2x on RCSB PDB site
Description: Crystal structure of YagE, a prophage protein belonging to the dihydrodipicolinic acid synthase family from E. coli K12 in complex with pyruvate
Class: lyase
Keywords: TIM Barrel, Protein-Ligand Complex, Aldolase, LYASE
Deposited on
2010-05-19, released
2011-04-13
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-04-13, with a file datestamp of
2011-04-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.181
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Uncharacterized protein yagE
Species: Escherichia coli [TaxId:83333]
Gene: b0268, JW0261, yagE
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3n2xa_ - Chain 'B':
Compound: Uncharacterized protein yagE
Species: Escherichia coli [TaxId:83333]
Gene: b0268, JW0261, yagE
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3n2xb_ - Chain 'C':
Compound: Uncharacterized protein yagE
Species: Escherichia coli [TaxId:83333]
Gene: b0268, JW0261, yagE
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3n2xc_ - Chain 'D':
Compound: Uncharacterized protein yagE
Species: Escherichia coli [TaxId:83333]
Gene: b0268, JW0261, yagE
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3n2xd_ - Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3n2xA (A:)
alftgiippvstiftadgqldkpgtaaliddlikagvdglfflgsggefsqlgaeerkai
arfaidhvdrrvpvligtggtnaretielsqhaqqagadgivvinpyywkvseanliryf
eqvadsvtlpvmlynfpaltgqdltpalvktladsrsniigikdtidsvahlrsmihtvk
gahphftvlcgyddhlfntlllggdgaisasgnfapqvsvnllkawrdgdvakaagyhqt
llqipqmyqldtpfvnvikeaivlcgrpvsthvlppaspldeprkaqlktllqqlklc
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3n2xB (B:)
alftgiippvstiftadgqldkpgtaaliddlikagvdglfflgsggefsqlgaeerkai
arfaidhvdrrvpvligtggtnaretielsqhaqqagadgivvinpyywkvseanliryf
eqvadsvtlpvmlynfpaltgqdltpalvktladsrsniigikdtidsvahlrsmihtvk
gahphftvlcgyddhlfntlllggdgaisasgnfapqvsvnllkawrdgdvakaagyhqt
llqipqmyqldtpfvnvikeaivlcgrpvsthvlppaspldeprkaqlktllqqlklc
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3n2xC (C:)
alftgiippvstiftadgqldkpgtaaliddlikagvdglfflgsggefsqlgaeerkai
arfaidhvdrrvpvligtggtnaretielsqhaqqagadgivvinpyywkvseanliryf
eqvadsvtlpvmlynfpaltgqdltpalvktladsrsniigikdtidsvahlrsmihtvk
gahphftvlcgyddhlfntlllggdgaisasgnfapqvsvnllkawrdgdvakaagyhqt
llqipqmyqldtpfvnvikeaivlcgrpvsthvlppaspldeprkaqlktllqqlklc
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3n2xD (D:)
alftgiippvstiftadgqldkpgtaaliddlikagvdglfflgsggefsqlgaeerkai
arfaidhvdrrvpvligtggtnaretielsqhaqqagadgivvinpyywkvseanliryf
eqvadsvtlpvmlynfpaltgqdltpalvktladsrsniigikdtidsvahlrsmihtvk
gahphftvlcgyddhlfntlllggdgaisasgnfapqvsvnllkawrdgdvakaagyhqt
llqipqmyqldtpfvnvikeaivlcgrpvsthvlppaspldeprkaqlktllqqlklc