PDB entry 3n0i

View 3n0i on RCSB PDB site
Description: Crystal Structure of Ad37 fiber knob in complex with GD1a oligosaccharide
Class: cell adhesion
Keywords: adenovirus, fiber knob, ganglioside, GD1a, virus-receptor complex, oligosaccharide structure, protein carbohydrate interaction, cell adhesion
Deposited on 2010-05-14, released 2010-12-29
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-02-02, with a file datestamp of 2011-01-28.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.16
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fiber
    Species: HUMAN ADENOVIRUS 37 [TaxId:52275]
    Gene: L5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3n0ia_
  • Chain 'B':
    Compound: Fiber
    Species: HUMAN ADENOVIRUS 37 [TaxId:52275]
    Gene: L5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3n0ib_
  • Chain 'C':
    Compound: Fiber
    Species: HUMAN ADENOVIRUS 37 [TaxId:52275]
    Gene: L5
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3n0ic_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3n0iA (A:)
gamgswnpkydtrtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyh
iinnktnpkiksftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlv
aypkpsnskkyardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenve
fettsftfsyiaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >3n0iA (A:)
dtrtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyhiinnktnpki
ksftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlvaypkpsnskk
yardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenvefettsftfsy
iaqe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3n0iB (B:)
gamgswnpkydtrtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyh
iinnktnpkiksftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlv
aypkpsnskkyardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenve
fettsftfsyiaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >3n0iB (B:)
ydtrtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyhiinnktnpk
iksftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlvaypkpsnsk
kyardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenvefettsftfs
yiaqe

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3n0iC (C:)
gamgswnpkydtrtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyh
iinnktnpkiksftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlv
aypkpsnskkyardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenve
fettsftfsyiaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >3n0iC (C:)
trtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyhiinnktnpkik
sftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlvaypkpsnskky
ardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenvefettsftfsyi
aqe