PDB entry 3mzd

View 3mzd on RCSB PDB site
Description: Structure of penicillin-binding protein 5 from E. coli: cloxacillin acyl-enzyme complex
Class: hydrolase/antibiotic
Keywords: BETA-LACTAM ANTIBIOTIC, PENICILLIN-BINDING PROTEIN, DD-CARBOXYPEPTIDASE, HYDROLASE, HYDROLASE-ANTIBIOTIC complex
Deposited on 2010-05-12, released 2011-03-16
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-08-24, with a file datestamp of 2011-08-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.216
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-alanyl-D-alanine carboxypeptidase dacA
    Species: Escherichia coli [TaxId:83333]
    Gene: b0632, dacA, JW0627, pfv
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3mzda1, d3mzda2
  • Heterogens: CXV, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3mzdA (A:)
ddlniktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamka
gkfketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamad
faagsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpney
siykekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavm
ggrtfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvylti
prgrmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipegnfgdp
vid

    Sequence, based on observed residues (ATOM records): (download) 
    >3mzdA (A:)
niktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagkf
ketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirginlqsgndacvamadfaa
gsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpneysiy
kekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavmggr
tfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvyltiprg
rmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipegnf