PDB entry 3mtn
View 3mtn on RCSB PDB site
Description: Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor
Class: hydrolase
Keywords: ubiquitin-specific protease activity, hydrolase, ubiquitin biology, structural genomics consortium, sgc, activator, chromatin regulator, nucleus, protease, thiol protease, transcription, transcription regulation, ubl conjugation pathway, isopeptide bond, phosphoprotein, inhibitor
Deposited on
2010-04-30, released
2010-06-09
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-02-27, with a file datestamp of
2013-02-22.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.22
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin carboxyl-terminal hydrolase 21
Species: Homo sapiens [TaxId:9606]
Gene: PP1490, USP21, USP23
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3mtna_ - Chain 'B':
Compound: ubiquitin variant ubv.21.4
Species: Homo sapiens [TaxId:9606]
Gene: RPS27A, UBA52, UBA80, UBB, UBC, UBCEP1, UBCEP2, UBQ
Database cross-references and differences (RAF-indexed):
- Uniprot P62988 (3-78)
- expression tag (2)
- engineered mutation (66)
- engineered mutation (70)
- engineered mutation (72)
Domains in SCOPe 2.04: d3mtnb_ - Chain 'C':
Compound: Ubiquitin carboxyl-terminal hydrolase 21
Species: Homo sapiens [TaxId:9606]
Gene: PP1490, USP21, USP23
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3mtnc_ - Chain 'D':
Compound: ubiquitin variant ubv.21.4
Species: Homo sapiens [TaxId:9606]
Gene: RPS27A, UBA52, UBA80, UBB, UBC, UBCEP1, UBCEP2, UBQ
Database cross-references and differences (RAF-indexed):
- Uniprot P62988 (3-78)
- expression tag (2)
- engineered mutation (66)
- engineered mutation (70)
- engineered mutation (72)
Domains in SCOPe 2.04: d3mtnd_ - Heterogens: ZN, CL, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3mtnA (A:)
mgsshhhhhhssglvprgssghvglrnlgntcflnavlqclsstrplrdfclrrdfrqev
pgggraqelteafadvigalwhpdsceavnptrfravfqkyvpsfsgysqqdaqeflkll
merlhleinrrgrrappilangpvpspprrggalleepelsdddranlmwkryleredsk
ivdlfvgqlksclkcqacgyrsttfevfcdlslpipkkgfaggkvslrdcfnlftkeeel
esenapvcdrcrqktrstkkltvqrfprilvlhlnrfsasrgsikkssvgvdfplqrlsl
gdfasdkagspvyqlyalcnhsgsvhyghytalcrcqtgwhvyndsrvspvsenqvasse
gyvlfyqlmqepp
Sequence, based on observed residues (ATOM records): (download)
>3mtnA (A:)
ghvglrnlgntcflnavlqclsstrplrdfclrrdfrqevpgggraqelteafadvigal
whpdsceavnptrfravfqkyvpsfsgysqqdaqeflkllmerlhleinrrlsdddranl
mwkryleredskivdlfvgqlksclkcqacgyrsttfevfcdlslpipkkgfaggkvslr
dcfnlftkeeelesenapvcdrcrqktrstkkltvqrfprilvlhlnrfsargsikkssv
gvdfplqrlslgdfasspvyqlyalcnhsgsvhyghytalcrcqtgwhvyndsrvspvse
nqvassegyvlfyqlm
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3mtnB (B:)
gshmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtls
dyniqkwstlflllrlrggggggsg
Sequence, based on observed residues (ATOM records): (download)
>3mtnB (B:)
hmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkwstlflllrlrgg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3mtnC (C:)
mgsshhhhhhssglvprgssghvglrnlgntcflnavlqclsstrplrdfclrrdfrqev
pgggraqelteafadvigalwhpdsceavnptrfravfqkyvpsfsgysqqdaqeflkll
merlhleinrrgrrappilangpvpspprrggalleepelsdddranlmwkryleredsk
ivdlfvgqlksclkcqacgyrsttfevfcdlslpipkkgfaggkvslrdcfnlftkeeel
esenapvcdrcrqktrstkkltvqrfprilvlhlnrfsasrgsikkssvgvdfplqrlsl
gdfasdkagspvyqlyalcnhsgsvhyghytalcrcqtgwhvyndsrvspvsenqvasse
gyvlfyqlmqepp
Sequence, based on observed residues (ATOM records): (download)
>3mtnC (C:)
ghvglrnlgntcflnavlqclsstrplrdfclrrdfrqevpgggraqelteafadvigal
whpdsceavnptrfravfqkyvpsfsgysqqdaqeflkllmerlhleinrrsdddranlm
wkryleredskivdlfvgqlksclkcqacgyrsttfevfcdlslpipkkgfgkvslrdcf
nlftkeeelesenapvcdrcrqktrstkkltvqrfprilvlhlnrfsasrgsikkssvgv
dfplqrlslgdfasspvyqlyalcnhsgsvhyghytalcrcqtgwhvyndsrvspvsenq
vassegyvlfyqlm
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3mtnD (D:)
gshmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtls
dyniqkwstlflllrlrggggggsg
Sequence, based on observed residues (ATOM records): (download)
>3mtnD (D:)
hmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkwstlflllrlrgg