PDB entry 3mkb

View 3mkb on RCSB PDB site
Description: Crystal structure determination of Shortfin Mako (Isurus oxyrinchus) hemoglobin at 1.9 Angstrom resolution
Class: Oxygen Storage, Oxygen Transport
Keywords: Hemoglobin, Oxygen Affinity, Isurus oxyrinchus, Shortfin Mako, Oxygen Storage, Oxygen Transport
Deposited on 2010-04-14, released 2011-01-26
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-11-06, with a file datestamp of 2013-11-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.202
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemoglobin subunit alpha
    Species: Isurus oxyrinchus [TaxId:57983]
    Database cross-references and differences (RAF-indexed):
    • PDB 3MKB (0-139)
    Domains in SCOPe 2.06: d3mkba_
  • Chain 'B':
    Compound: Hemoglobin subunit beta
    Species: Isurus oxyrinchus [TaxId:57983]
    Database cross-references and differences (RAF-indexed):
    • PDB 3MKB (0-135)
    Domains in SCOPe 2.06: d3mkbb_
  • Chain 'C':
    Compound: Hemoglobin subunit alpha
    Species: Isurus oxyrinchus [TaxId:57983]
    Database cross-references and differences (RAF-indexed):
    • PDB 3MKB (0-139)
    Domains in SCOPe 2.06: d3mkbc_
  • Chain 'D':
    Compound: Hemoglobin subunit beta
    Species: Isurus oxyrinchus [TaxId:57983]
    Database cross-references and differences (RAF-indexed):
    • PDB 3MKB (0-135)
    Domains in SCOPe 2.06: d3mkbd_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3mkbA (A:)
aftgverstigaiakilastpeaygaealarlfathpgaksyfdyadysaagakvqlhgg
kviravvsaaehdddlhahlmvlavthgkkllvdpsnfpmlsecilvtlathlaefspat
hcavdkllsaisselsskyr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3mkbB (B:)
vhwtqeerdeivktffsanssaigtkalermfvvfpwtnayfakxxxfsasihaaivvga
lqdavkheddvkaefvniskahadklhidpgsfhlltdsfivelahlkkvaftpfvfavw
ikffqvvidaissqyh

    Sequence, based on observed residues (ATOM records): (download) 
    >3mkbB (B:)
vhwtqeerdeivktffsanssaigtkalermfvvfpwtnayfakfsasihaaivvgalqd
avkheddvkaefvniskahadklhidpgsfhlltdsfivelahlkkvaftpfvfavwikf
fqvvidaissqyh

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3mkbC (C:)
aftgverstigaiakilastpeaygaealarlfathpgaksyfdyadysaagakvqlhgg
kviravvsaaehdddlhahlmvlavthgkkllvdpsnfpmlsecilvtlathlaefspat
hcavdkllsaisselsskyr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3mkbD (D:)
vhwtqeerdeivktffsanssaigtkalermfvvfpwtnayfakxxxfsasihaaivvga
lqdavkheddvkaefvniskahadklhidpgsfhlltdsfivelahlkkvaftpfvfavw
ikffqvvidaissqyh

    Sequence, based on observed residues (ATOM records): (download) 
    >3mkbD (D:)
vhwtqeerdeivktffsanssaigtkalermfvvfpwtnayffsasihaaivvgalqdav
kheddvkaefvniskahadklhidpgsfhlltdsfivelahlkkvaftpfvfavwikffq
vvidaissqyh